ACGATCCGCGGAATTCAAGGCCATACCTAAACATGATAAAAGCAATCTAC
AGCAAACCAGTAGCCAACATCAAAGTAAATGGAGACAAGCTGGAAGCAAT
CCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTT
TCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAG
ATCAAGGGGGTACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGC
AGATGATATGATAGTATATATAAGTGACCCTAAAAATTCTACCAGAGAAC
TCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAAC
TCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAA
AGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAAT
ATCTTGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAAC
TTCAAATCTCTGAAGAAAGAAATTAAGGAAGATCTCAGAAGATGGAAAGA
TCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCT
TGCTCAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACT
CAATTCTTCAAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXTCTTTTCAGAAAAGTTCGATTAAGTGTATGTTAAAGTGCCAAGCCG
TACAGCACTGGGGATAGAATAGATGCTTAACTCAGGTCTGCCTTCTGAGT
TGTTAACAAGTGTCGGCTCTGTTTTCATATGACACGCACGGAAGGTAAAA
AGCTTCAGTTTTATCTTCTGCATAAGAAACAAAGCCCCAATGAGGGAAAG
CCTTGATGTTGTCCATAGATGGTCCTTGTTAGGAAGATGCACTTCACAGA
AAGAAGTTAGATGAGCCATGGACGATCTTGCAAACCTGCTGTATTATGAT
CTTACCTGCTGCGAAACAGCAGTGGATAGCAAGAGAAAACTGTCCACACA
ATGTGTGGGCACAAGGTTTATGCAAAGCAATAAAAGAGAAAGGGGTTACT
GTTTCTTTTCTGTTGCTGTGAAAACCATGATGACCCACAGCAACTTGCAG
AAGGATAGGATCTGTTTAGTTTCTACTTCTGGGTCACAGTCCATCAGTCC
AGACAAGAGCTTAAGTAGGAACTTGTACAAGCCATGCTGGTGCAAAGAAG
CTTCTGGCTGACTTGAAGGCTTATGCTTACCTCTTGTGTATGGTCAAGGA
CTGCTGGCCTTGGAATGGTGTGGCCCGCACAA

Query= MSMg01no095_j13.g1 MSMg01no095_j13.g1 CHROMAT_FILE:
MSMg01no095_j13.g1 PHD_FILE: MSMg01no095_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:40 2005
         (503 letters)



>mm_chr3_39366649_39367552
          Length = 904

 Score =  890 bits (460), Expect = 0.0
 Identities = 493/504 (97%), Gaps = 1/504 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttttcag-aaaagttcgattaagtgtatgttaaagtgccaagccgtacagcactgggg 59
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttttcagcaaaagttcgattaagtgtatgttaaagtgccaagccgtacagcactgggg 260

                                                                       
Query: 60  atagaatagatgcttaactcaggtctgccttctgagttgttaacaagtgtcggctctgtt 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 atagaatagatgcttaactcaggtctgccttctgagttgttaacaagtgtcagctctgtt 320

                                                                       
Query: 120 ttcatatgacacgcacggaaggtaaaaagcttcagttttatcttctgcataagaaacaaa 179
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcatatgacacgcatggaaggtaaaaagcttcagttttatcttctgcataagaaacaaa 380

                                                                       
Query: 180 gccccaatgagggaaagccttgatgttgtccatagatggtccttgttaggaagatgcact 239
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 gccccaatgagggaaagccttgatgttgtccatacatggtccttgttaggaagatgcact 440

                                                                       
Query: 240 tcacagaaagaagttagatgagccatggacgatcttgcaaacctgctgtattatgatctt 299
           |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||
Sbjct: 441 tcacagaaagaagttagatgggccatggacgatcttgcaaacctgctgtagcatgatctt 500

                                                                       
Query: 300 acctgctgcgaaacagcagtggatagcaagagaaaactgtccacacaatgtgtgggcaca 359
           || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acatgctgtgaaacagcagtggatagcaagagaaaactgtccacacaatgtgtgggcaca 560

                                                                       
Query: 360 aggtttatgcaaagcaataaaagagaaaggggttactgtttcttttctgttgctgtgaaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggtttatgcaaagcaataaaagagaaaggggttactgtttcttttctgttgctgtgaaa 620

                                                                       
Query: 420 accatgatgacccacagcaacttgcagaaggataggatctgtttagtttctacttctggg 479
           |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accaggatgacccaaagcaacttgcagaaggataggatctgtttagtttctacttctggg 680

                                   
Query: 480 tcacagtccatcagtccagacaag 503
           ||||||||||||||||||||||||
Sbjct: 681 tcacagtccatcagtccagacaag 704


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 904
Length adjustment: 10
Effective length of query: 493
Effective length of database: 894
Effective search space:   440742
Effective search space used:   440742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)