Query= MSMg01no096_k08.b1 MSMg01no096_k08.b1 CHROMAT_FILE:
MSMg01no096_k08.b1 PHD_FILE: MSMg01no096_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:04 2005
(496 letters)
>mm_chr3_61468846_61469744
Length = 899
Score = 895 bits (463), Expect = 0.0
Identities = 485/493 (98%), Gaps = 3/493 (0%)
Strand = Plus / Minus
Query: 5 gaattcttccagtgttgctaccaaagaagaaggagatggcccagaccaaatagttaattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gaattcttccagtgttgctaccaaagaagaaggagatggcccagaccaaatagttaattt 638
Query: 65 gctgccatttaaatgtagtccaaacagattcaaaca-tttttttttcttttatactggta 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 637 gctgccatttaaatgtagtccaaacagattcaaacattttttttttcttttatactggta 578
Query: 124 gtcttggaaggaaagaactataagatttctttttgtcagataattacatactggaattgg 183
|| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 577 gttttggaagaaaagaactataagatttctttttgtcagataattacatactggaatttg 518
Query: 184 gtgaagttttcccctctgctctggcttccttgaagaacttcagccaacaagcccctttaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gtgaagttttcccctctgctctggcttccttgaagaacttcagccaacaagcccctttaa 458
Query: 244 gcagaagttatctaacaaaccaaagtacacattcatctggtgggcatcctaagggttgca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gcagaagttatctaacaaaccaaagtacacattcatctggtgggcatcctaagggttgca 398
Query: 304 gcacagcaaattcttggttgcaaattttgaaaaggttttcatggatattttgatgtagat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gcacagcaaattcttggttgcaaattttgaaaaggttttcatggatattttgatgtagat 338
Query: 364 gatacatctttggaaaaagtgacaaagttctttccaaataatcgtgaacaagatacctct 423
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 337 gatacatctttggaaaaagtgacaacgttctttccaaataatcgtgaacaagatacctct 278
Query: 424 ttgggaggtttgttttgattattttgtttcattgcttgtttgc--ttgtttgctatgagc 481
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 277 ttgggaggtttgttttgattattttgtttcattgtttgtttgcgcttgtttgctatgagc 218
Query: 482 tgctgaggggagg 494
|||||||||||||
Sbjct: 217 tgctgaggggagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 899
Length adjustment: 10
Effective length of query: 486
Effective length of database: 889
Effective search space: 432054
Effective search space used: 432054
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_k08.g1 MSMg01no096_k08.g1 CHROMAT_FILE:
MSMg01no096_k08.g1 PHD_FILE: MSMg01no096_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:04 2005
(356 letters)
>mm_chr3_61382286_61383041
Length = 756
Score = 629 bits (325), Expect = 0.0
Identities = 349/357 (97%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 1 tttgttcagctctgagcccca-ttttttaatggggttatttgattttcttgagtccacct 59
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 200 tttgttcagctctgagccccatttttttaatggggttatttgattttctggagtccacct 259
Query: 60 tcttgagttctttatatatattggatattagtcagctatccgattttggataggtagaga 119
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||
Sbjct: 260 tcttgagttctttatatatattggatattagtcagctatctgatttaggataggtaaaga 319
Query: 120 tccttccccaatctgttggtggtctttttgtcttattgcgggacattttaagatttaaca 179
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 320 tcctttcccaatctgttggtggtcttttcgtcttattgcgggacattttaagatttaaca 379
Query: 180 ttttctttgcctgatatagccatttcttctagtgaattttcaattcctaagaatttctct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttttctttgcctgatatagccatttcttctagtgaattttcaattcctaagaatttctct 439
Query: 240 tctatcttgttggcaagcaggcatatccatggacaccaagaagtgactttacaacaatca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctatcttgttggcaagcaggcatatccatggacaccaagaagtgactttacaacaatca 499
Query: 300 gtaatctttccagccagctctcgagggccctgtgatgagatttgtcatctctagtga 356
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 gtaatctttccagccagctctcgagggccctgtgatgagatttgtcttctctagtga 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
