Query= MSMg01no096_l12.b1 MSMg01no096_l12.b1 CHROMAT_FILE:
MSMg01no096_l12.b1 PHD_FILE: MSMg01no096_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:10 2005
(299 letters)
>mm_chr3_65336854_65337552
Length = 699
Score = 578 bits (299), Expect = e-169
Identities = 299/299 (100%)
Strand = Plus / Plus
Query: 1 catctccagattacagaacacttgagagcattggcctcttcactgatgaagcagatttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catctccagattacagaacacttgagagcattggcctcttcactgatgaagcagatttca 260
Query: 61 gtccactgagtactggaacattttggtacatgaagtttctgtttgatttagtcataagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtccactgagtactggaacattttggtacatgaagtttctgtttgatttagtcataagga 320
Query: 121 aactagcagagtcattgtcttacacattacactgttactgtaagcaagtcaagacaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactagcagagtcattgtcttacacattacactgttactgtaagcaagtcaagacaatca 380
Query: 181 ttttggtcccagaaggtccaacaattctttgatcaataacatattggacatttatatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttggtcccagaaggtccaacaattctttgatcaataacatattggacatttatatctt 440
Query: 241 taagatctttttgcttgaaaagtagacagatttagagccttttgtaaaaactataggat 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagatctttttgcttgaaaagtagacagatttagagccttttgtaaaaactataggat 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_l12.g1 MSMg01no096_l12.g1 CHROMAT_FILE:
MSMg01no096_l12.g1 PHD_FILE: MSMg01no096_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:11 2005
(370 letters)
>mm_chr3_65508574_65509344
Length = 771
Score = 619 bits (320), Expect = 0.0
Identities = 329/332 (99%), Gaps = 2/332 (0%)
Strand = Plus / Minus
Query: 5 caccattctaatggttatacaaacacct-aaaaagttggcagtgtttatgaatgtattcc 63
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 332 caccattctaatggttatacaaacacctaaaaaagttggcagtgtttatgaatgtattcc 273
Query: 64 taaacataaagttatactgcataaaagaaaaactactatactaatataatatgtattaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 taaacataaagttatactgcataaaagaaaaactactatactaatataatatgtattaaa 213
Query: 124 aatatgttttaaagacaaggtagaagaaatggatatgtctattaaaacaaaaacaaagac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 aatatgttttaaagacaaggtagaagaaatggatatgtctattaaaacaaaaacaaagac 153
Query: 184 aacaacaa-aaaaaaatccaggcacaaaaatccagtaaattcaggaaaatgtgaaaagac 242
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 152 aacaacaacaaaaaaatccaggcacaaaaatccaggaaattcaggaaaatgtgaaaagac 93
Query: 243 caaatttacaaattattgaactacaggaaagggaagaaaccaagtcaaaggcacagaaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 caaatttacaaattattgaactacaggaaagggaagaaaccaagtcaaaggcacagaaaa 33
Query: 303 tatttttaacaaaatcacagaagaaaaattcc 334
||||||||||||||||||||||||||||||||
Sbjct: 32 tatttttaacaaaatcacagaagaaaaattcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 771
Length adjustment: 9
Effective length of query: 361
Effective length of database: 762
Effective search space: 275082
Effective search space used: 275082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
