CAGAATTTGCGGCGCTATACGACTCCTACTCCGAGAGGATCCGCGGAATT
CTAATCCATCCCAGGGATGCTCTGGCAATGGATAATATCCATAGATATGA
TCCATCTGGAATACAGAAATGCAAGGGATTACAGTATGATATAGCTGGAG
TATACAATGTCTTAGCATACAACTGCAATTATTTTTTAATTGGTTATGTT
ATTTTTTTTTACATTTCAAATGTTATCCCTCTTCCAGGTTTGCCCTCCAT
AAACCCCTCTCCCCTCTCCCTCCTCTTGCCACTGTGAGGGTACTCCCCCA
CCCACACAATTCCACATCAAAACCCTAGAATTTCCCTATGCTGGGGCATC
AAGCCTTCACAGGACCAAGGGCCTCCCCTCCCATTGATGCCAGATAAGGC
AATCCTCTTCTACATATGCAACTGGGGCCATGGGTCCCTCCATGTGTATT
CTTTGGTTGGTGGTTTAGTCCCTGAGAGCTCTGGGGAGGTCTGGTTAGTT
GATATTGTTGTTCTTTCTATGGGGCTGCAAAACCCCTTCAGCTCCTTCAG
TCCTTCCCCTAACTCCTCCACTGGGACAACTGTAATTCTTTACAATAAAG
GAAACGTTGGTTTGAAGAAGGAAATAACTATGCTTAAAAGTGACATCTAA
TTGAGGGGCAGACAAAGTGAAAGATCAGAGAAAA

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTATTAAGACTGAGGAAATATATAGATAA
CCTGCATCTCCATGCAAATGATCAGAGGATGGATGTCCATTGTCCATTAG
GTTTTAGGTGACTTTTGATCTTTTACATTTATACATGAAGAATATTAATT
TATATCTGACAATTGTATATTTTTATAAAAGCAAGCCTTCATCAAGATTT
AATACCCACAATTTTTCTTAATTTCAGAATGTTCTGTTCATTCAGTAGCA
AGACAGACTAATGAGATGGAAAAGGACAATAATGAAAATAAATATTCATC
CAATGAACAATGCAATAAGCTCAGAGTGGTAGTAAAAGAAAGTCAATTAA
TTTTTATGAGTATTTTAAAATTTCAATTTTACATGATTATTTTCAGAGTA
ATGAGTAAATGTTGTTATAACACAACATATAGTCACAGATGGACTTTTTT
AAAATAGAAAATCTGCATATATATTTAATATGATTTTACTCATATTCACA
TAAAAATCTTTGTAACAGTCAGCAATCTAAATATTCTTAAAATAGAATCA
GAGAGAAACACCTTTAACTCAAACAATTAATGCAAAAATTCCATCCCTTT
TCTGCAGTTATATCTGCTTCAGCTGAAAAGTCACCA

Query= MSMg01no097_h01.g1 MSMg01no097_h01.g1 CHROMAT_FILE:
MSMg01no097_h01.g1 PHD_FILE: MSMg01no097_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:11 2005
         (614 letters)



>mm_chr3_44435221_44436235
          Length = 1015

 Score = 1166 bits (603), Expect = 0.0
 Identities = 612/615 (99%), Gaps = 1/615 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tattaagactgaggaaatatatagataacctgcatctccatgcaaatgatcagaggatgg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 815 tattaagactgaggaaatatatagataacctgcatctccatgcaaatgatcacaggatgg 756

                                                                       
Query: 61  atgtccattgtccattaggttttaggtgacttttgatcttttacatttatacatgaagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 atgtccattgtccattaggttttaggtgacttttgatcttttacatttatacatgaagaa 696

                                                                       
Query: 121 tattaatttatatctgacaattgtatatttttataaaagcaagccttcatcaagatttaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tattaatttatatctgacaattgtatatttttataaaagcaagccttcatcaagatttaa 636

                                                                       
Query: 181 tacccacaatttttcttaatttcagaatgttctgttcattcagtagcaagacagactaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tacccacaatttttcttaatttcagaatgttctgttcattcagtagcaagacagactaat 576

                                                                       
Query: 241 gagatggaaaaggacaataatgaaaataaatattcatccaatgaacaatgcaataagctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gagatggaaaaggacaataatgaaaataaatattcatccaatgaacaatgcaataagctc 516

                                                                       
Query: 301 agagtggtagtaaaagaaagtcaattaatttttatgagtattttaaaatttcaattttac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 agagtggtagtaaaagaaagtcaattaatttttatgagtattttaaaatttcaattttac 456

                                                                       
Query: 361 atgattattttcagagtaatgagtaaatgttgttataacacaacatatagtcacagatgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atgattattttcagagtaatgagtaaatgttgttataacacaacatatagtcacagatgg 396

                                                                       
Query: 421 acttttttaaaatagaaaatctgcatatatatttaatatgattttactcatattcacata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 acttttttaaaatagaaaatctgcatatatatttaatatgattttactcatattcacata 336

                                                                       
Query: 481 aaaatctttgtaacagtcagcaatctaaatattcttaaaatagaatcagagagaaacacc 540
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 335 aaaatctttgtaacagtcagcaatctaaatattcttaaaatagaagcagagagaaacacc 276

                                                                       
Query: 541 tttaactcaaacaattaatgc-aaaaattccatcccttttctgcagttatatctgcttca 599
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tttaactcaaacaattaatgcaaaaaattccatcccttttctgcagttatatctgcttca 216

                          
Query: 600 gctgaaaagtcacca 614
           |||||||||||||||
Sbjct: 215 gctgaaaagtcacca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1015
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1005
Effective search space:   607020
Effective search space used:   607020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)