CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATTGTTTTCAATAGCTGAGTAGTATGCCATTGTGTAAATGTACCAT
ATTTTCTGTATCTATTCCTCTGCTGAAGGTTCTTTCCAGCTTCTGGCTAT
TATATATTATGCTGCTGTGACCATAGTGGAAAATTTCCTGAACAGAATAT
CAATGGCTTATGCTCTAAGATAAAGAATTGACAAATGGGACCTCATAAAA
TTGCAAAGCTTCTGTAAGGCAAAGGACACTGTCAATAGGACAAAATGGCA
ACCAATAGATTGTGAAAAGATCTTTCCCACTCCTACATCTGAGAGAGGGC
TACTATCCAATATATACAAAGAACTCAAGAAATTAGACCCTAGACACTCA
AATAACCCTATTACAAATGGAGTACAGAGCTTAACCAAGAATTTTCAACT
GTGGAAGTGGGAGAGACAAACCATTTCCCTAAAAAAATGTTCAGGGGAAA
TAGGGTGTTGCGTATAAAACCCCCCCCCCCAAACTAAGGTGGAGTAGAGA
CTCCCATGACTTCCAGGCAGGGGACCTTAGATGAACTGCCTAACCGTATT
GCAAAGAAAACTCCCTTCATTTCATCCCCATCTTTAATTCCCCCAATACC
CATTTACGAAATTGGCCCGGCCGCCTCCACCATATTCCTCCCAATCCAAT
TTGGTCCCCCCCCCCCTCCTC

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTCTTTTGACTAATTTTTGAAACCACA
TGTTTACTTACTCTAAATTACATAGTCGCTAAATTTAAAATATTAGGACT
AAGAATTATGGGTTCAAAACATGTGCTAATATAACACTTGAAGTATTATT
TTTGTTACAAGAAAAGGATTGCTTAAGAAATATAAGGAATTAAGCAGACC
TGAGAAAGCCATGGCAAGGAGAAGGGCAGAGCACTCTACTGGTGTTCTGA
TTGGGTGTTTCTACTTAATTTAATATCTCGTAGTGATTGACATACTTAGG
AAACATAATTTAAATTTAAATATTGAAATCCCTTTAATTTCTCTGCTCTC
TCCTTATTTAAAATTAATCGTTCTGACCCCAAGCTCCCTCAGCACTGCCT
TCTCAGTTCTAATCACATGCAGCTCCTATTCCAGAGCATTTCCATTCCTT
GCCTTCCTTCTTTTATGAGACCTGGAGCCACCTGCCTCATTCATTTTCTT
TCTCTAAACCACAAATGAAGCTTCCCGCGCGTGTGAGCAGAAATGGAGAA
GGCAAGAAACCCCCTTCTTTAACAGTGATACCAGGAGAGCAGGCTACAGG
TTCCATTCCCCCCTTTATTTTAGAGTCGGCGTTCCCAGTGGATGACATTG
ATGAAGTCATTTATCCCT

Query= MSMg01no098_d21.g1 MSMg01no098_d21.g1 CHROMAT_FILE:
MSMg01no098_d21.g1 PHD_FILE: MSMg01no098_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:17 2005
         (539 letters)



>mm_chr3_109810892_109811830
          Length = 939

 Score = 1011 bits (523), Expect = 0.0
 Identities = 535/539 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttcttttgactaatttttgaaaccacatgtttacttactctaaattacatagtcgctaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tttcttttgactaatttttgaaaccacatgtttacttactctaaattacatagtcgctaa 680

                                                                       
Query: 61  atttaaaatattaggactaagaattatgggttcaaaacatgtgctaatataacacttgaa 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 679 atttaaaatattaggactaagaattatgggttcaaaacatatgctaatataacacttgaa 620

                                                                       
Query: 121 gtattatttttgttacaagaaaaggattgcttaagaaatataaggaattaagcagacctg 180
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 619 gtattatttttgttacaagaaaaggattgcttaagaaatatagggaattaagcagacctg 560

                                                                       
Query: 181 agaaagccatggcaaggagaagggcagagcactctactggtgttctgattgggtgtttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agaaagccatggcaaggagaagggcagagcactctactggtgttctgattgggtgtttct 500

                                                                       
Query: 241 acttaatttaatatctcgtagtgattgacatacttaggaaacataatttaaatttaaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 acttaatttaatatctcgtagtgattgacatacttaggaaacataatttaaatttaaata 440

                                                                       
Query: 301 ttgaaatccctttaatttctctgctctctccttatttaaaattaatcgttctgaccccaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttgaaatccctttaatttctctgctctctccttatttaaaattaatcgttctgaccccaa 380

                                                                       
Query: 361 gctccctcagcactgccttctcagttctaatcacatgcagctcctattccagagcatttc 420
           |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 379 gctccctcagcactgccttctcagttctaatcacatgcagttcctattcccgagcatttc 320

                                                                       
Query: 421 cattccttgccttccttcttttatgagacctggagccacctgcctcattcattttctttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cattccttgccttccttcttttatgagacctggagccacctgcctcattcattttctttc 260

                                                                      
Query: 481 tctaaaccacaaatgaagcttcccgcgcgtgtgagcagaaatggagaaggcaagaaacc 539
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tctaaaccacaaatgaagcttcccgcgcgtgtgagcagaaatggagaaggcaagaaacc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space:   491441
Effective search space used:   491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)