Query= MSMg01no098_f14.b1 MSMg01no098_f14.b1 CHROMAT_FILE:
MSMg01no098_f14.b1 PHD_FILE: MSMg01no098_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:26 2005
(480 letters)
>mm_chr3_108361297_108362176
Length = 880
Score = 890 bits (460), Expect = 0.0
Identities = 475/480 (98%)
Strand = Plus / Minus
Query: 1 actcatcaactgccaaccaaggaataaagatgaagaacttgtcggaaacctggacccagt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 484 actcatcaactgccaaccaagggataaagatgaagaacttgtcggaaacctggacccagt 425
Query: 61 gtaggagagttgagctaaaatcattagtgtctccaagatgacactgaagcctctgcctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gtaggagagttgagctaaaatcattagtgtctccaagatgacactgaagcctctgcctgc 365
Query: 121 catatgtggggaaacctcatggtcacgaacatttttgcttcaggggattccagaaagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 catatgtggggaaacctcatggtcacgaacatttttgcttcaggggattccagaaagcca 305
Query: 181 acctttagatctctgtgttaatcagccctcagcagcaagtctgtatgtccagataaacca 240
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acctttagatctctacgttaatcagccctcagcagcaagtctgtatgtccagataaacca 245
Query: 241 cgcccccattgatatgattatctatctcctgcttaaacacctatgctgggtggtagagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cgcccccattgatatgattatctatctcctgcttaaacacctatgctgggtggtagagca 185
Query: 301 tttggttagcattggcaaggtcttgggttcattctccaacactggtaaaaacaacctaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tttggttagcattggcaaggtcttgggttcattctccaacactggtaaaaacaacctaca 125
Query: 361 gctggccgtctatttggctctttagtccctcatcagaatctttgaaaactgaggctcact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gctggccgtctatttggctctttagtccctcatcagaatctttgaaaactgaggctcact 65
Query: 421 ggcgaatgatataggctttgttcagacttcccagaaggcaaagagaggcattctgcatag 480
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 64 ggggaatgatataggctttgttcagacttcccagaaggtaaagagaggcattctgcatag 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_f14.g1 MSMg01no098_f14.g1 CHROMAT_FILE:
MSMg01no098_f14.g1 PHD_FILE: MSMg01no098_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:26 2005
(285 letters)
>mm_chr3_108235301_108235985
Length = 685
Score = 501 bits (259), Expect = e-146
Identities = 277/285 (97%), Gaps = 5/285 (1%)
Strand = Plus / Plus
Query: 1 ctgaattc-catgccctctgctccagttagtctgtgccagctgcccacacctacctacca 59
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 204 ctgaattcacatgcactctgctccagttagtctgtgccagctgcccacacctacc----a 259
Query: 60 cagctcaaagcatgctgggtcgcctcagagcgcaggcttaccacactgggctcggcgtct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cagctcaaagcatgctgggtcgcctcagagcgcaggcttaccacactgggctcggcgtct 319
Query: 120 ttgttacttgtctgactgtccaattacactgagctcctcaaaggcagagactgttctgat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttgttacttgtctgactgtccaattacactgagctcctcaaaggcagagactgttctgat 379
Query: 180 tcagtcagcaaaacatattcattatgaaggatcactgagtggcttttgttctatggaatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcagtcagcaaaacatattcattatgaaggatcactgagtggcttttgttctatggaatc 439
Query: 240 tggttaatcgctctcttgcctcagaaagagaatcgtgtctaattg 284
||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgggtaagcgctctcttgcctcagaaagagaatcgtgtctaattg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
