Query= MSMg01no099_b11.b1 MSMg01no099_b11.b1 CHROMAT_FILE:
MSMg01no099_b11.b1 PHD_FILE: MSMg01no099_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:25 2005
(276 letters)
>mm_chr3_104883479_104884156
Length = 678
Score = 441 bits (228), Expect = e-128
Identities = 265/284 (93%), Gaps = 12/284 (4%)
Strand = Plus / Minus
Query: 5 gaattctctgct-gtaaccttgaggctccatggctcagtgcagtgaattttgtctgtgtt 63
|||||||||||| | || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattctctgctggaaaaattgaggctccatggctcagtgcagtgaattttgtctgtgtt 358
Query: 64 tccaaagcatggtataatgtgtcaatgtccaagaagcctaaataaccatcacatgacttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tccaaagcatggtataatgtgtcaatgtccaagaagcctaaataaccatcacatgacttt 298
Query: 124 gtgaaatgggtataatgaaaggggacacagaattataaaaagaaaaggaagaagaaagga 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 297 gtgaaatgggtataatgaaaggggacacagaattataaaaagaaaaggaaaaagaaagga 238
Query: 184 aactctttctctttttttt-----------ggggggggaggggtgtcgagacaggatttc 232
||| |||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 237 aaccctttctctttttttgcggggggggggggggggggaagggtgtcgagacaggatttc 178
Query: 233 tctgtatagccctggctgtcctagaactcactttgtagaccagg 276
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tctgtatagccctggctgtcctagaactcactttgtagaccagg 134
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 678
Length adjustment: 9
Effective length of query: 267
Effective length of database: 669
Effective search space: 178623
Effective search space used: 178623
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no099_b11.g1 MSMg01no099_b11.g1 CHROMAT_FILE:
MSMg01no099_b11.g1 PHD_FILE: MSMg01no099_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:25 2005
(247 letters)
>mm_chr3_104743537_104744183
Length = 647
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Plus
Query: 1 tttagatgatgacttctgagcccacatgtggaggcagttgggggtggagagcaggagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttagatgatgacttctgagcccacatgtggaggcagttgggggtggagagcaggagagc 260
Query: 61 agtgagagccaagatggatggaccaaaacctaagggttgctgcaggagaaatcctgactg 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 agtgagagccaagatggatggaccaaaacctaagagttgctgcaggagaaatcctgactg 320
Query: 121 taggtaggtgttctttccccagctcaagcaggggcccaggtcagagagctgcaacgtccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggtaggtgttctttccccagctcaagcaggggcccaggtcagagagctgcaacgtccc 380
Query: 181 aggctatgattgatgagcactgtgctcctgcagcttcgcctctggcttctcggctggggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggctatgattgatgagcactgtgctcctgcagcttcgcctctggcttctcggctggggt 440
Query: 241 acaccag 247
|||||||
Sbjct: 441 acaccag 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
