Query= MSMg01no107_m10.b1 MSMg01no107_m10.b1 CHROMAT_FILE:
MSMg01no107_m10.b1 PHD_FILE: MSMg01no107_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:07 2005
(327 letters)
>mm_chr3_3656140_3656866
Length = 727
Score = 603 bits (312), Expect = e-177
Identities = 324/328 (98%), Gaps = 2/328 (0%)
Strand = Plus / Minus
Query: 1 taaaacataattggcttgctttctactagttcataatactagatgatatgaaaagtaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 taaaacataattggcttgctttctactagttcataatactagatgatatgaaaagtaaac 468
Query: 61 tttatgagagttttcaaagctaagctgcagtctgtaatgtctgtagcatgctggtctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tttatgagagttttcaaagctaagctgcagtctgtaatgtctgtagcatgctggtctgtt 408
Query: 121 gcttaacaattctattacaattgagtagccctggtctttcctcttcaatgttaagagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gcttaacaattctattacaattgagtagccctggtctttcctcttcaatgttaagagcaa 348
Query: 181 acctgcataatttaatagaaagtaattgaatataaaaaattgaattgaacaatttcttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 acctgcataatttaatagaaagtaattgaatataaaaaattgaattgaacaatttcttca 288
Query: 241 gtgaagtttgaatactttattgtgtaggaaagtattc-ttatgttgaaattttaccatac 299
||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 287 gtgaagtttgaatactttattgtgtaggaaagtattcctt-tggtgaaattttaccatac 229
Query: 300 tgtaaaattatcaacaagaagttattta 327
|||||||| |||||||||||||||||||
Sbjct: 228 tgtaaaataatcaacaagaagttattta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_m10.g1 MSMg01no107_m10.g1 CHROMAT_FILE:
MSMg01no107_m10.g1 PHD_FILE: MSMg01no107_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:07 2005
(276 letters)
>mm_chr3_3533881_3534555
Length = 675
Score = 489 bits (253), Expect = e-143
Identities = 270/277 (97%), Gaps = 4/277 (1%)
Strand = Plus / Plus
Query: 1 gaataattataaaaatgccacagtgattgaaagcaaacacaggctttcaaacatgtcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gaataattataaaaatgccacagtgattgaaagcaaacacaggctttcaaacatgtcagt 257
Query: 61 caaatgttaattacatagatattgggcttcattttcctgctcaatatgaaacgcaatgca 120
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 258 caaatgttaattatatagatattgggcttcattttcctgctcaatatgaaactcaatgca 317
Query: 121 aattaaatttataaatttataaaa---gtgtaaggacacataataaaatttctgtcttct 177
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 318 aattaaatttataaatttataaaataagtgtaaggacacataagaaaatttctgtcttct 377
Query: 178 caaaaagtctttttcccccccaaaataagtactgtctcaaagagataaactgatacttca 237
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caaaaagtctttttcccccc-aaaataagtactgtctcaaagagataaactgatacttca 436
Query: 238 ttaaaatgatggattttcttcatggaatgtcaccata 274
|||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttaaaatgatggattttcttcatggaatgtcaccata 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 675
Length adjustment: 9
Effective length of query: 267
Effective length of database: 666
Effective search space: 177822
Effective search space used: 177822
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
