Query= MSMg01no108_b09.b1 MSMg01no108_b09.b1 CHROMAT_FILE:
MSMg01no108_b09.b1 PHD_FILE: MSMg01no108_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:49 2005
(362 letters)
>mm_chr3_143259199_143259959
Length = 761
Score = 669 bits (346), Expect = 0.0
Identities = 355/358 (99%), Gaps = 1/358 (0%)
Strand = Plus / Minus
Query: 5 gaattctttagtattcaaagaaaaaaaatgtaaagattgaaaccactagataattttatt 64
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaattctttagtattaaaag-aaaaaaatgtaaagattgaaaccactagataattttatt 503
Query: 65 atcaggagaattaaacaaacaaacagataaacacaacccccaaatgtgagttttaaaagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atcaggagaattaaacaaacaaacagataaacacaacccccaaatgtgagttttaaaagt 443
Query: 125 caagaaactagaaagaaagtagcatccggtttcaaagctcagcctccttagacttcatgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caagaaactagaaagaaagtagcatccggtttcaaagctcagcctccttagacttcatgt 383
Query: 185 aacagctaattaaacatatggcatatattatctgaaccacaaattaatttgtttggctag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aacagctaattaaacatatggcatatattatctgaaccacaaattaatttgtttggctag 323
Query: 245 agtaggtacaaacaaatgaaaacaaaggtaatctgcacagttttaacttgagcaagatgt 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 322 agtaggtacaaacaaatgaaaacaaagggaatctgcacagttttaacttgagcaagatgt 263
Query: 305 ggagcgccctgctggccactggcatttggttcctgtctgagccactcacactggaaca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggagcgccctgctggccactggcatttggttcctgtctgagccactcacactggaaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 761
Length adjustment: 9
Effective length of query: 353
Effective length of database: 752
Effective search space: 265456
Effective search space used: 265456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_b09.g1 MSMg01no108_b09.g1 CHROMAT_FILE:
MSMg01no108_b09.g1 PHD_FILE: MSMg01no108_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:49 2005
(247 letters)
>mm_chr3_143124141_143124787
Length = 647
Score = 455 bits (235), Expect = e-132
Identities = 244/247 (98%)
Strand = Plus / Plus
Query: 1 tctctgacctcttttagtaatgcctagcattctttcattcataaattatttatggcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctgacctcttttagtaatgcctagcattctttcattcataaattatttatggcttgt 260
Query: 61 ttaacctccctagctcaactactaaaggtgctttgagtaagcagggtggatttcttccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaacctccctagctcaactactaaaggtgctttgagtaagcagggtggatttcttccag 320
Query: 121 aactatagagcccatggttgaaatcacagcccccaagtttcttgccatggtttctcagtc 180
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 321 aactatagagcccatggttgagatcacagctcccaagtttcttgccatggtttctcagtc 380
Query: 181 ctagagaagacttgcctcaggttactgactgatacggggattagaacctacaacctctga 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 ctagagaagacttgcctcaggttactgactgatacagggattagaacctacaacctctga 440
Query: 241 gtaccca 247
|||||||
Sbjct: 441 gtaccca 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
