CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTCTGGATTCTGCTAGGTGTCACCAATGAGGATTCTGCGAAAAA
TATGTTTCTAGGTATTGGAAGCTGACACTTAGGAAATGGGGTAGAGGAAG
GGAGTCCACAGGAGGGAAGAAAGCACTGGGATTGGCTTAGTTCTCTAAGA
ATGGGACTAGAGAGTGAGGGAGGCTATAGAACGTAGTTCCCTACAGGTTG
TTGGGATGAGACTCAGTACTGGATTGGGAAGAGAGGATAGAGAGTGAAGA
AGGAAACTCATTTACATTCTCTGCTTAATTGTTTGTTTCACAGGCAGGCT
TGTCTGCAGAGGTCCCAGGAAATGCCTGCTGGAAATAGGGGCTGGGATAG
ACAAATGAGTTGGAAGAAAGGTTGGAGGAGAATGTCTGCATGGTTCTATG
AAGATGGAATCTGAGAGAACAGGAGGCCACATCAGCTGGTCTGCTACAGA
GTTGGGAGTGAGTCAACGGGGTGATTTTAGGATACCCAAGATATAAGATA
CAATTTCCTAAACACATGAAACTCAAGAAAAATAAAGACTGAAGTGTGGA
CACTATGCCCCTCCTTAGAAGTGGGAACAAAACACCCTTGGAGGCTATAG
AACGTCTGACTTCTAGCTGATGACTTCCTTTGCCTATACATTTTATTTTT
TATAATTCGGCTTTCAATTGTTGCAATCATT

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTATTATTCTGGGGTCCCTGTAGA
AATCTCTTTTAAAAATTTGAAAATTTTAAAGTTTTATTTTTTAAGACTTT
ATGAAGTTCACATAAAATATAGTAGGTAAACCTAATCATTAGCCATGCAC
TAGGATTTTTAATTCTGTTCTTTGTAGCATCAGTGATGCTCTAGAATGAC
TCCAAAGTCTGCAGGATCAAGTCAAGTCATTCGGCAGAGTTACTGTTAGC
CACTGAGTGCAGTGTACTCGTGTGTTTTATTGACCTTGGTGCTGACATGG
AATCATTTGCTTCTTCAAACACAGAAAATTGGTCACAAGAAATATTTCAA
GAGTCGAAGAAGAAAGTGTCTAGTACGGCTAAGCTCCTCATTAGACATCC
TGAAAGCCAAACACTTTCTTATGTGTGGGGTTTTTTGGTTTTGTTTTTGT
TTGNTTGNTTNCNTNNCNNCTTNTTTTTCCCCTCCCCCCCTTTTCCCCCC
TTTCCTTTCCCCCTTTTTCTTCTTCCCCCCTTTTTTCNCTCTTTTCTTTC
CTTCCTCTTTCCCCTTTTTCTTTCTTTCCTCTTCTCTTCTTCTCTTTTCT
CCCCTCCCCTCTCCCCTTTCCTTCCTTTTTTTTTTCTTTTCTCCCTCCTC
TCCTTTCCTCTTCTTTTTTTTCTCCCCCCTCTTTTCTTTCCN

Query= MSMg01no112_p09.g1 MSMg01no112_p09.g1 CHROMAT_FILE:
MSMg01no112_p09.g1 PHD_FILE: MSMg01no112_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:16 2005
         (428 letters)



>mm_chr3_61325605_61326432
          Length = 828

 Score =  804 bits (416), Expect = 0.0
 Identities = 425/428 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttattattctggggtccctgtagaaatctcttttaaaaatttgaaaattttaaagtttt 60
           ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tttattattctggggaccctgtagaagtctcttttaaaaatttgaaaattttaaagtttt 260

                                                                       
Query: 61  attttttaagactttatgaagttcacataaaatatagtaggtaaacctaatcattagcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attttttaagactttatgaagttcacataaaatatagtaggtaaacctaatcattagcca 320

                                                                       
Query: 121 tgcactaggatttttaattctgttctttgtagcatcagtgatgctctagaatgactccaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tgcactaggatttttaattctgttctttgtagcatcagtgatgctctagaatggctccaa 380

                                                                       
Query: 181 agtctgcaggatcaagtcaagtcattcggcagagttactgttagccactgagtgcagtgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtctgcaggatcaagtcaagtcattcggcagagttactgttagccactgagtgcagtgt 440

                                                                       
Query: 241 actcgtgtgttttattgaccttggtgctgacatggaatcatttgcttcttcaaacacaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actcgtgtgttttattgaccttggtgctgacatggaatcatttgcttcttcaaacacaga 500

                                                                       
Query: 301 aaattggtcacaagaaatatttcaagagtcgaagaagaaagtgtctagtacggctaagct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaattggtcacaagaaatatttcaagagtcgaagaagaaagtgtctagtacggctaagct 560

                                                                       
Query: 361 cctcattagacatcctgaaagccaaacactttcttatgtgtggggttttttggttttgtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctcattagacatcctgaaagccaaacactttcttatgtgtggggttttttggttttgtt 620

                   
Query: 421 tttgtttg 428
           ||||||||
Sbjct: 621 tttgtttg 628


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space:   343161
Effective search space used:   343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)