CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGTTCATGTGTCTATCTTTTCTTTGTTTGTTGAAATATTACTTTA
TTCCTTTTTCTAGGGCATAATTTCCCTCTTTGTGTTGTAGTTTTCCCTTT
AGTATCCTTTGAAGGGTTGGATTTGTGTAAAGATATTGTGTGAATTTGGT
TTTGTCATGGAATGCTTTGGTTTCTCCATCTATGGTAATTGAGAGTTTTG
CTGGGTATAGTAGCCTGGGCTGGCACCTGTGTTCTCCTAGGATCTGTATA
ACATCTGTCCAGGATCATCTGGCTTTCATAGTATCTGGTGAGAAATATGA
TGTAATTCTTATATGTCTGCCTTTATATGTTATTTGATCTTTTACCCTCA
CTACTTTTAATATTCTATCTTTATTTAGCCATTTGTTGTCCTGATTAGTA
TGTGTCAGGAGGAATTTCTTTTCTGGTCCAGTCTATTTGGAGTTCTGTAG
GCTTTTTGTATGTTCATGGTCATCTCTTTCTTTAGGCTTGGGAAGGTTTC
TTCTTTAATTTTGTTGAAGATATTTACTGGCCCTTTAAGTTGAAAATCTT
CATTCTCATCTATACCTATTATCCTTAGGTTTGGTCTTCTCATTGTGTCT
GGATTTCCAGCATATTTTCAATTAGAATATTTTTGCATTTTGAATTTTTT
TGATTGCTGCGTTCATGTTTTGCATGGAATCTTCTGCTCCTGA

CAATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCCTTAGCCCTGTATTTATCAGCAAT
TAAGAAGAGCTGCTTGGTAAGCTGATTAAAATTTTTGCATAGGAAATATA
CCCAACAAAGTGACTTATTAATTCACTGCCTTTAAAAGCATCCAAAAATG
GACTCTGGCAGAGGGCACTTAAACAGCCTAGCCAATCCTCTCAGTATGCT
CTGTCCTCATTGAATATGTATGTACTATTATTCTTTTTTACATCTTCAGA
ATAAAATAACTTAGACTAAAATTCCACGCTATACCTTGTCAGTTAGCATT
GATCTAGTCATTTCCAGTTGATTGACCTTTTACTTGACAAGATACATTAT
ATTGAGAGTTTTATTATTTTTAATTTATATTTATTTTTTTTGACAGTGAA
AAAGCATGAAATTTATATGTAGGTGAGGAGACACACATGTACCTACCAAA
GGAATCTTTAAACATAAAACTGGAAGTCATAATGTCTACATAAAGGAGAT
GTGAAATAAAAATAAAACAATACTACCAACAACAAAACCACAGCCCATCA
AAACCTTACAAGACAAAGGACTTCCAAAGATATCATTGAGTTTGATTTCT
GATCAAATTACAATAGTTGGGTCAACACAAACATTTTAATTTCACAAATT
GGAAAAGGCTCTAAGGAAATTTTAAGAGAATTTATTGAAAATAAGT

Query= MSMg01no114_m17.g1 MSMg01no114_m17.g1 CHROMAT_FILE:
MSMg01no114_m17.g1 PHD_FILE: MSMg01no114_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:34 2005
         (672 letters)



>mm_chr3_4728923_4729994
          Length = 1072

 Score = 1236 bits (639), Expect = 0.0
 Identities = 665/675 (98%), Gaps = 3/675 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccttagccctgtatttatcagcaattaagaagagctgcttggtaagctgattaaaattt 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 201 tccttagccctgtatttatcagcaattaagaaaagctgcttggtaagctgattaaaactt 260

                                                                       
Query: 61  ttgcataggaaatatacccaacaaagtgacttattaattcactgcctttaaaagcatcca 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 ttgcataggaaatatacccaacaaagtgacttattaattcactgactttaaaagcatcca 320

                                                                       
Query: 121 aaaatggactctggcagagggcacttaaacagcctagccaatcctctcagtatgctctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatggactctggcagagggcacttaaacagcctagccaatcctctcagtatgctctgt 380

                                                                       
Query: 181 cctcattgaatatgtatgtactattattcttttttacatcttcagaataaaataacttag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcattgaatatgtatgtactattattcttttttacatcttcagaataaaataacttag 440

                                                                       
Query: 241 actaaaattccacgctataccttgtcagttagcattgatctagtcatttccagttgattg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actaaaattccacgctataccttgtcagttagcattgatctagtcatttccagttgattg 500

                                                                       
Query: 301 accttttacttgacaagatacattatattgagagttttattatttttaatttatatttat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accttttacttgacaagatacattatattgagagttttattatttttaatttatatttat 560

                                                                       
Query: 361 tt---tttttgacagtgaaaaagcatgaaatttatatgtaggtgaggagacacacatgta 417
           ||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttatttttttgacagtgaaaaggcatgaaatttatatgtaggtgaggagacacacatgta 620

                                                                       
Query: 418 cctaccaaaggaatctttaaacataaaactggaagtcataatgtctacataaaggagatg 477
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cctagcaaaggaatctttaaacataaaactggaagtcataatgtctacataaaggagatg 680

                                                                       
Query: 478 tgaaataaaaataaaacaatactaccaacaacaaaaccacagcccatcaaaaccttacaa 537
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 tgaaataaaaataaaacaatactaccaacaacaaaaccacggcccatcaaaaccttacaa 740

                                                                       
Query: 538 gacaaaggacttccaaagatatcattgagtttgatttctgatcaaattacaatagttggg 597
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 741 gacaaaggacttccaaagatatcattgagtttgatttctgatcaaattaaaatagttggg 800

                                                                       
Query: 598 tcaacacaaacattttaatttcacaaattggaaaaggctctaaggaaattttaagagaat 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcaacacaaacattttaatttcacaaattggaaaaggctctaaggaaattttaagagaat 860

                          
Query: 658 ttattgaaaataagt 672
           |||||||||||||||
Sbjct: 861 ttattgaaaataagt 875


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space:   703044
Effective search space used:   703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)