Query= MSMg01no115_f02.b1 MSMg01no115_f02.b1 CHROMAT_FILE:
MSMg01no115_f02.b1 PHD_FILE: MSMg01no115_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:14 2005
(319 letters)
>mm_chr3_32206075_32206792
Length = 718
Score = 514 bits (266), Expect = e-150
Identities = 284/290 (97%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 13 gaattcagtatgtgcacttccttcctaaaagtgttagaaggactctggttctgtataggg 72
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaattcagtatgtggacttccttcctaaaagtgttagaaggactctggttctgtataggg 272
Query: 73 aatatagcagtcactccagacatcaacaaactcagtgagagagtggggccctcgaatgtt 132
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 273 aatatagcagtcactccagacatcaacaaactcagtgagagagtggggccctagaatgtt 332
Query: 133 tgtcagggagcatctccctctaacctcttccagcctgtcaaggccaagagtgaggctgag 192
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tttcagagagcatctccctctaacctcttccagcctgtcaaggccaagagtgaggctgag 392
Query: 193 tcccacagatcaagggggaatctcgctggggcctccagttaaattattcacataagatag 252
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tcccacagatcaaggggga-tctcgctggggcctccagttaaattattcacataagatag 451
Query: 253 ttactggcaaccacactgactaagccagttaaaagttttaagcttttttt 302
||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 452 ttactggcaaccacactgattaagccagttaaaagttttaagcttttttt 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 718
Length adjustment: 9
Effective length of query: 310
Effective length of database: 709
Effective search space: 219790
Effective search space used: 219790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_f02.g1 MSMg01no115_f02.g1 CHROMAT_FILE:
MSMg01no115_f02.g1 PHD_FILE: MSMg01no115_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:14 2005
(173 letters)
>mm_chr3_32331876_32332448
Length = 573
Score = 319 bits (165), Expect = 5e-92
Identities = 171/173 (98%)
Strand = Plus / Minus
Query: 1 cagagtagaagaaaagctatggtgaatagattctataaacagtgtgcccagctgactcaa 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cagagaagaagaaaagctatggtgaatagattctataaacagtgtgcccagctgactcaa 261
Query: 61 tggaagtagggagagaagatagcctacagaacatagtatagaaacagaggaattaaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tggaagtagggagagaagatagcctacagaacatagtatagaaacagaggaattaaacag 201
Query: 121 ggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaag 173
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggaaagaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaag 148
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 573
Length adjustment: 8
Effective length of query: 165
Effective length of database: 565
Effective search space: 93225
Effective search space used: 93225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
