Query= MSMg01no115_m24.b1 MSMg01no115_m24.b1 CHROMAT_FILE:
MSMg01no115_m24.b1 PHD_FILE: MSMg01no115_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:51 2005
(633 letters)
>mm_chr3_68010480_68011511
Length = 1032
Score = 1108 bits (573), Expect = 0.0
Identities = 615/629 (97%), Gaps = 1/629 (0%)
Strand = Plus / Plus
Query: 5 gaattccttcatggagaggaaaaaagaccatccaagaaacctaaaccttacactcacctc 64
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattccttcatggagaggaaaaaagaccatccaagaaatctaaaccttacactcacctc 264
Query: 65 atatgcatagatatatctctatatctacctagttatataaattgtttagagcatggtgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atatgcatagatatatctctatatctacctagttatataaattgtttagagcatggtgga 324
Query: 125 gggcagaggagctcagaaaatagctgacaagttgttaggaaagtagagttaaatagaatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggcagaggagctcagaaaatagctgacaagttgttaggaaagtagagttaaatagaatg 384
Query: 185 aaatgcccaacttcataaaaaaaaattaagatcttgatgggtatttttctatacaaaatc 244
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 aaatgccccacttcataaaaaaaaattaagatcttgatgggtatttttctatacaaaacc 444
Query: 245 acttagtcagatttgcatagaccctgaccttgaaagtgggagagtgagaaaattgagtat 304
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 445 acttagtcagatttgcatagaacctgactttgaaagtgggagagtgagaaaattgagtat 504
Query: 305 atcaatctgtaggtgggaatcttcatgtaactaagcaggaaaatgtgtaaattttatgta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcaatctgtaggtgggaatcttcatgtaactaagcaggaaaatgtgtaaattttatgta 564
Query: 365 aagattgtcagaaacacactagcatgacaagaaggattgtgaaagctacatcatcctcac 424
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 565 aagattgttagaaacacactagcatgacaagaaggattgtgaaagctacgccatcctcac 624
Query: 425 agtacgtatttatttggttgatcctatacaattaaagtggcaaaataaagcccatccata 484
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 625 agtacgtatttatttggttgattctatacaattaaagtggcaatataaagcccatccata 684
Query: 485 caaatttgtcataaagttaaaaatctttaaataaaactttatgacataaaacttgtagga 544
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 685 caaatttatcataaagttaaaaatctttaaataaaactttatgacaaaaaacttgtagga 744
Query: 545 atcactactttcttgtatattcatttttatattatttttaccagaaaaactggatatgga 604
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 745 atcactactttcttgtatattcatttttatattatttttaccagaaaa-cttgatatgga 803
Query: 605 tactgatgatcatgcttgtaattagctca 633
|||||||||||||||||||||||||||||
Sbjct: 804 tactgatgatcatgcttgtaattagctca 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_m24.g1 MSMg01no115_m24.g1 CHROMAT_FILE:
MSMg01no115_m24.g1 PHD_FILE: MSMg01no115_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:51 2005
(521 letters)
>mm_chr3_68120822_68121742
Length = 921
Score = 977 bits (505), Expect = 0.0
Identities = 517/521 (99%)
Strand = Plus / Minus
Query: 1 aatatgttctattagataatatattttattttaatgtaaattttttatatttttgagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 aatatgttctattagataatatattttattttaatgtaaattttttatatttttgagaat 716
Query: 61 tttaagcaagcaggtaacatggtttgattatattcaccatctcatgcatattactcattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tttaagcaagcaggtaacatggtttgattatattcaccatctcatgcatattactcattt 656
Query: 121 ttaaacaagcatgtggttttatatacttccttcttattaactttcaaaaacctggtatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttaaacaagcatgtggttttatatacttccttcttattaactttcaaaaacctggtatat 596
Query: 181 acttgatgcttactgcacagttccagtttttccagccagttcaaatatttggttgctaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 acttgatgcttactgcacagttccagtttttccagccagttcaaatatttggttgctaac 536
Query: 241 catggctggtagctacagtataaaacagtctagatattggtctttcaatcacaggtcatt 300
||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 535 catggctggtaactacagtatagaacagtctagacattggtctttcaatcacaggtcatt 476
Query: 301 tgatcacattcattgacaaacaggtggggctcactgccagcatcagcatctgtgagtgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tgatcacattcattgacaaacaggtggggctcactgccagcatcagcatctgtgagtgat 416
Query: 361 ccctcttcttattgaatgccaaaaaatattgctccctgaagacttgataaaatctctact 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ccctcttcgtattgaatgccaaaaaatattgctccctgaagacttgataaaatctctact 356
Query: 421 ttccatacctgttaaaagatccttgaatatttgcttcaaatgtctcacttccaaatcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ttccatacctgttaaaagatccttgaatatttgcttcaaatgtctcacttccaaatcatt 296
Query: 481 aatacttttggagatttctttgtaggctattaacctctgtt 521
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aatacttttggagatttctttgtaggctattaacctctgtt 255
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
