Query= MSMg01no115_p14.b1 MSMg01no115_p14.b1 CHROMAT_FILE:
MSMg01no115_p14.b1 PHD_FILE: MSMg01no115_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:04 2005
(159 letters)
>mm_chr3_122108232_122108790
Length = 559
Score = 288 bits (149), Expect = 1e-82
Identities = 152/153 (99%)
Strand = Plus / Plus
Query: 5 gaattccacaaacattcagttcatgctacgttcacccctagaacccagtcattgaaggta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacaaacattcagttcatgctacgttcacccctagaacccagtcattgaaggta 264
Query: 65 gttacaaaacacctttgaggagcacaaacttaggtagatggagccagagaaggactggtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttacaaaacacctttgaggagcacaaacttaggtagatggagccagagaaggactggtg 324
Query: 125 tgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgt 157
||||||||||| |||||||||||||||||||||
Sbjct: 325 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space: 83201
Effective search space used: 83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no115_p14.g1 MSMg01no115_p14.g1 CHROMAT_FILE:
MSMg01no115_p14.g1 PHD_FILE: MSMg01no115_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:04 2005
(317 letters)
>mm_chr3_122201616_122202333
Length = 718
Score = 607 bits (314), Expect = e-178
Identities = 317/318 (99%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 1 ctaagccagcagtggagggacagtagggggcatctatcagagtcccccagaggatgcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ctaagccagcagtggagggacagtagggggcatctatcagagtcccccagaggatgcacc 459
Query: 61 agactctcatttgcatgaaggagacaggagactcagagaaagatggcatctgcattacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agactctcatttgcatgaaggagacaggagactcagagaaagatggcatctgcattacca 399
Query: 121 ttaatatttgctttaagtctaccccaggctgc-aggagagcttcccactcctgtagggtg 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 398 ttaatatttgctttaagtctaccccaggctgcaaggagagcttcccactcctgtagggtg 339
Query: 180 tgacactgtaaagatcattaagagctaacattcatgccaaagggccacctcaggacctaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgacactgtaaagatcattaagagctaacattcatgccaaagggccacctcaggacctaa 279
Query: 240 ggaaacatgggacagcaagcagggatggaggctccagcggggcacattctctgggaagac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggaaacatgggacagcaagcagggatggaggctccagcggggcacattctctgggaagac 219
Query: 300 cacacacacacacacaca 317
||||||||||||||||||
Sbjct: 218 cacacacacacacacaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 718
Length adjustment: 9
Effective length of query: 308
Effective length of database: 709
Effective search space: 218372
Effective search space used: 218372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
