Query= MSMg01no120_a10.b1 MSMg01no120_a10.b1 CHROMAT_FILE:
MSMg01no120_a10.b1 PHD_FILE: MSMg01no120_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:20 2005
(621 letters)
>mm_chr3_130934064_130935084
Length = 1021
Score = 1081 bits (559), Expect = 0.0
Identities = 606/629 (96%), Gaps = 13/629 (2%)
Strand = Plus / Minus
Query: 6 gaattcaagactgatctgggccatcctacaaagccactcaaaaccttttataaagggatt 65
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gaattcaagactgatgtgggccatcctacaaagccactcaaaaccttttataaagggatt 584
Query: 66 cgtcactgggttcggccaggtggttaagtctggctaaggtcagcttccaggaacttgttt 125
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 583 cgtcactgggttcggccaggtggttaagcctggctaaggtcagcttccaggaactcgttt 524
Query: 126 gagatcgggctgcctgcaactgaagaaagtaaaatcagcacgtgagggatggctgacaca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gagatcgggctgcctgcaactgaagaaagtaaaatcagcacgtgagggatggctgacaca 464
Query: 186 ccagtgcacgctggtggtgctcgctcatggtgagttaagctgttcatacacgcgacatgg 245
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 463 ccagtgcacgctggtggtgctcgctcatggtgagttaagctgttcatacacgtgacatgg 404
Query: 246 gcctttgtttgaaccaccttaattttaatccccttaacatttcaacctaagtaacttaag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gcctttgtttgaaccaccttaattttaatccccttaacatttcaacctaagtaacttaag 344
Query: 306 tctattaaaaatacaaggtgtggctgtaattccacggggaaatttttcttgctaacaagc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tctattaaaaatacaaggtgtggctgtaattccacggggaaatttttcttgctaacaagc 284
Query: 366 actggggcaacataaatagtaatctaaaaacacttgagtgatggcatcattgttgtggtc 425
| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 283 attggggcaacataaatagtaatctaaaaacacttgcgtgatggcatcattgttatggtc 224
Query: 426 cctcttattccccacctggggacagagactcgcgtgtcctgagctgatctcagattccag 485
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 223 cctcttattccccacctggggacagagactcgcgtgtcctgagctgatttcagattccag 164
Query: 486 atggagcccaggataaccttgaaccttgatcttactgcctccctagccctttgggtgctg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atggagcccaggataaccttgaaccttgatcttactgcctccctagccctttgggtgctg 104
Query: 546 ggaaccgaacccaggacatactgtgtgcctcacaagca--ctgcc-----------aact 592
|||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 103 ggaaccgaacccaggacatactgtgtgcctcacaagcactctgccagctgagctataaca 44
Query: 593 ccacactttgaaaaaacccacttggtggt 621
||| |||||||||||||||||||||||||
Sbjct: 43 ccatactttgaaaaaacccacttggtggt 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_a10.g1 MSMg01no120_a10.g1 CHROMAT_FILE:
MSMg01no120_a10.g1 PHD_FILE: MSMg01no120_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:20 2005
(626 letters)
>mm_chr3_130879875_130880902
Length = 1028
Score = 1102 bits (570), Expect = 0.0
Identities = 613/628 (97%), Gaps = 2/628 (0%)
Strand = Plus / Plus
Query: 1 acctgaaaaa--aaaaaagtctgaattctagaacccatcgtagattgtctcagagatgtg 58
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 acctgaaaaaagaaaaaagtctgaattctagaacccatggtagattgtctcagagatgtg 260
Query: 59 cggcttgaggtttggaacatagagatttatctgttggtccttttccccgtatccaccccg 118
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 261 cggcttgaggtttggaacatagagatttatctgtcggtccttttccctgtatccaccccg 320
Query: 119 cagagcactttctgagcaaatgtatgtggctggactttaattgtgttgctcattaatcct 178
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 cagagcactttctgagcagatgtatgtggcaggactttaattgtgttgctcattaatcct 380
Query: 179 tgctgtaatccagtcagccagtatctgctgatttttgcaaacgaggaaaccaattttgga 238
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 tgctgtaatccagtcagccagtatctgctggtttttgcaaacgaggaaaccaattttgga 440
Query: 239 gaactaaggggattaccaagtgtaagaactgacacgcacttgcacgctgggatttgaact 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaactaaggggattaccaagtgtaagaactgacacgcacttgcacgctgggatttgaact 500
Query: 299 ctgccctagtgcctccatgtcttaatattaaactgtgtcgttcctggtggctggcacgtg 358
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 ctgccctagtgcctccatgtcttaatattaaactgtgttgttcctggtggctggcacgtg 560
Query: 359 acagccagaggatgccaggcctacccggtgttgatctacagtatacaagctgtagatcta 418
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 acagccagaggatgccaggcctacctggtgttgatctacagtatacaagctgtagatcta 620
Query: 419 tcttgactgtctaacttaaggttctgtgtaatcatacataagtgatctatcttaggactt 478
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 621 tcttgactgtctaacttaaggttctgtgtaatcatatataaatgatctatcttaggactt 680
Query: 479 atcttagcatttcctataaggctggccaggttccatcaccttctgacaacatgaagagtc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atcttagcatttcctataaggctggccaggttccatcaccttctgacaacatgaagagtc 740
Query: 539 ataggtgctttgtgcttttttccctgcctttgtcttaaagcagcacattcactagtctgt 598
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ataggtgcttcgtgctttttttcctgcctttgtcttaaagcagcacattcactagtctgt 800
Query: 599 tggagatctgctggtgatggtaccggct 626
|||||||||||||||| |||||||||||
Sbjct: 801 tggagatctgctggtggtggtaccggct 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1028
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1018
Effective search space: 627088
Effective search space used: 627088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
