Query= MSMg01no121_d12.b1 MSMg01no121_d12.b1 CHROMAT_FILE:
MSMg01no121_d12.b1 PHD_FILE: MSMg01no121_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:55 2005
(283 letters)
>mm_chr3_43138197_43138880
Length = 684
Score = 513 bits (265), Expect = e-150
Identities = 279/284 (98%), Gaps = 1/284 (0%)
Strand = Plus / Minus
Query: 1 cagcttttaaaagctcatacctaaaggaagttattcattttacaaagaaactgtgagaat 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cagcttttaaaagctcacacctaaaggaagttattcattttacaaagaaactgtgagaat 425
Query: 61 gcttaagagttcctaccaatgtctgtacagagtccataactagaatggtactgttaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 424 gcttaagagttcctaccaatgtctgtacagagtccataactagaatggtcctgttaggct 365
Query: 121 gcatgatttttacctatactatttaagaggaaatgtagctacagttattttttaattttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gcatgatttttacctatactatttaagaggaaatgtagctacagttattttttaattttg 305
Query: 181 taattcatttagtttgaagtattgataacctactgcttttatactaattgcttgtctgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 taattcatttagtttgaagtattgataacctactgcttttatactaattgcttgtctgtc 245
Query: 241 ttagtaa-nataggtacaaactatctggagcatatttttgaatt 283
|||| || |||||||||||||||||||||||||||||||||||
Sbjct: 244 ttagaaattataggtacaaactatctggagcatatttttgaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 684
Length adjustment: 9
Effective length of query: 274
Effective length of database: 675
Effective search space: 184950
Effective search space used: 184950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_d12.g1 MSMg01no121_d12.g1 CHROMAT_FILE:
MSMg01no121_d12.g1 PHD_FILE: MSMg01no121_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:55 2005
(244 letters)
>mm_chr3_43081718_43082361
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Plus
Query: 1 agactttctttcattgctatggaatacaaactgtaggttttgtttaagcacaaaacccgt 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 agactttctttcattgctatggaataaaaactgtaggttttgtttaagcacaaaacccgt 260
Query: 61 gtttcttttcattttatgtgtatgtataagaccccgaatatgtacatggaatccatatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 gtttcttttcattttatgtgtatgtataagaccccgaatatgtacatgggatccatatgc 320
Query: 121 ttcctgctctgggaagtcataaatggtccatggatttttaaaagtagtgttagaggtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcctgctctgggaagtcataaatggtccatggatttttaaaagtagtgttagaggtagt 380
Query: 181 taagaatttgcttcttagaaaatgaacctaactcctttgtaagatcttaatcactagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagaatttgcttcttagaaaatgaacctaactcctttgtaagatcttaatcactagact 440
Query: 241 ctaa 244
||||
Sbjct: 441 ctaa 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
