Query= MSMg01no125_a16.b1 MSMg01no125_a16.b1 CHROMAT_FILE:
MSMg01no125_a16.b1 PHD_FILE: MSMg01no125_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:57 2005
(628 letters)
>mm_chr3_52653674_52654701
Length = 1028
Score = 1075 bits (556), Expect = 0.0
Identities = 609/628 (96%), Gaps = 3/628 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatgccctctaccgccagacccagggtggtctcagctcatatccgaatagtccc 63
||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 ggaattcatgccctcgactgccagacccagggtggtctcagctcatatctgaatagtccc 260
Query: 64 gtgtggctgcttctctgagtaagacatgcccattaattatgccaac---cacaacagagc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 gtgtggctgcttctctgagtaagacatgcccattaattatgccaacaaccacaacagagc 320
Query: 121 actcaaccccactccgggtccagtaacaactcggcaatccacagcagagcatccagatcc 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actcaaccccactctgggtccagtaacaactcggcaatccacagcagagcatccagatcc 380
Query: 181 actgtaacagctgcagactcatacttagatcacacggttcaagcacgtagacttgtggag 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 actgtaacagctgcagactcatacttagatcacacggttcaagctcgtagacttgtggag 440
Query: 241 gaagtgaatgcctataacctagcaggctgcccagccttctcttgtgagcatttgctgtgg 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagtgaatgcctataacccagcaggctgcccagccttctcttgtgagcatttgctgtgg 500
Query: 301 gtgtggacaagctaggcatggagagctctcctggggcaagggggagtaatgccctgaaga 360
||||||||||||||||||||||||||| |||||| ||| |||||||||||||| |||||
Sbjct: 501 gtgtggacaagctaggcatggagagctgacctgggacaaaggggagtaatgcccagaaga 560
Query: 361 actaaaacacatttgtcagaatctggactcgttttggctttcacacagctgcctttttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actaaaacacatttgtcagaatctggactcgttttggctttcacacagctgcctttttct 620
Query: 421 gatagttggctgtagtgcttaaatgcatgtgcctgcgaagtaggtcacacacacacatat 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatagttggctgtagcgcttaaatgcatgtgcctgcgaagtaggtcacacacacacatat 680
Query: 481 gcacgcacacgcacgcgtgcacacatgcgcacacaacattgtgtcgtcatttcttgacca 540
|||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 681 gcacgcacacgcacgcatgcacacatgtgcacacaacattgtgttgtcatttcttgacca 740
Query: 541 caccagaaaccacacttgcactcactgcttcctgacataaagtgctaacgtatacaaagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caccagaaaccacacttgcactcactgcttcctgacataaagtgctaacgtatacaaagg 800
Query: 601 cagtgctcgagctctgaactggtgaagt 628
|| |||||||||||||||||||||||||
Sbjct: 801 caatgctcgagctctgaactggtgaagt 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_a16.g1 MSMg01no125_a16.g1 CHROMAT_FILE:
MSMg01no125_a16.g1 PHD_FILE: MSMg01no125_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:57 2005
(247 letters)
>mm_chr3_52823420_52824066
Length = 647
Score = 371 bits (192), Expect = e-107
Identities = 201/204 (98%)
Strand = Plus / Minus
Query: 1 attagtcttattatgtatttcagtttgaagagggaactgccctataatgtagaagctacc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 389 attagtcttattatgtatttcaatttgaagagggaactgccctataatgtagaagctacc 330
Query: 61 aacaacctgctagcaacagccaagaaatggcacctcattagtctggggcccatgctgttc 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 329 aacaacctgctagcaacagccaagaaatggcacctcattagtctagggcccatgctgttc 270
Query: 121 ttagctagagttcatattgattcattacctcatatagtcagaatatataaactagaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttagctagagttcatattgattcattacctcatatagtcagaatatataaactagaaaca 210
Query: 181 aagcaagcttgtgcgtgtgtgtgt 204
||||||||||||| ||||||||||
Sbjct: 209 aagcaagcttgtgtgtgtgtgtgt 186
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
