Query= MSMg01no125_m05.b1 MSMg01no125_m05.b1 CHROMAT_FILE:
MSMg01no125_m05.b1 PHD_FILE: MSMg01no125_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:54 2005
(317 letters)
>mm_chr3_29919062_29919777
Length = 716
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 5 gaattccaggcagagtgacaataattacatcagcactatcaacaatagtagtcactttgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattccaggcagagtgacaataattacatcagcactatcaacaatagtagtcactttgt 457
Query: 65 attgaccaaatgctgtgtcccatgcaagattctacgacttacgtttagtgcttcatacga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 attgaccaaatgctgtgtcccatgcaagattctacgacttacgtttagtgcttcatacga 397
Query: 125 ttccctcacactgggataggtctgcatttcaatgacaaggtcctgcagaaggttgggcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttccctcacactgggataggtctgcatttcaatgacaaggtcctgcagaaggttgggcag 337
Query: 185 tagagtctggacaatataaaacaaagaaatgagtcaagggtgtgcagaagctgaagatct 244
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 taga-tctggacaatataaaacaaagaaatgagtcaagggtgtgcagaagctgaagatct 278
Query: 245 gtgaccagatcattacagtcattcagatggatggtcccaggcatccaagtttaggctcac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtgaccagatcattacagtcattcagatggatggtcccaggcatccaagtttaggctcac 218
Query: 305 taagaccaagcac 317
|||||||||||||
Sbjct: 217 taagaccaagcac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 716
Length adjustment: 9
Effective length of query: 308
Effective length of database: 707
Effective search space: 217756
Effective search space used: 217756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_m05.g1 MSMg01no125_m05.g1 CHROMAT_FILE:
MSMg01no125_m05.g1 PHD_FILE: MSMg01no125_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:54 2005
(211 letters)
>mm_chr3_29789073_29789683
Length = 611
Score = 377 bits (195), Expect = e-109
Identities = 207/211 (98%)
Strand = Plus / Plus
Query: 1 cttagactgcagtgcctgagtccattctactcacaaacaacatcataagacacaaacatg 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 cttagactgcagtgcctgagtccactctactcacaaacaacatcataagacacaaacatg 260
Query: 61 acagggcgacttttattaactgtgcagtatttgcattcaagtatagagtctgcatttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagggcgacttttattaactgtgcagtatttgcattcaagtatagagtctgcatttgaa 320
Query: 121 ggctttcttccttaaagaaatgactgtttcaaattacgatgactaaacacagactacaga 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 321 ggctttcttccttaaagaaatgactgtttcaaattatgatgactaaacacagactgcaga 380
Query: 181 tactcccaaaaccacagtaagagaacaagct 211
||||||||||||||||| |||||||||||||
Sbjct: 381 tactcccaaaaccacagcaagagaacaagct 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 611
Length adjustment: 9
Effective length of query: 202
Effective length of database: 602
Effective search space: 121604
Effective search space used: 121604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
