Query= MSMg01no128_d04.b1 MSMg01no128_d04.b1 CHROMAT_FILE:
MSMg01no128_d04.b1 PHD_FILE: MSMg01no128_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:12 2005
(157 letters)
>mm_chr3_142664875_142665431
Length = 557
Score = 271 bits (140), Expect = 2e-77
Identities = 151/156 (96%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 4 ggaattcctcttca--taccgctgcttcaaacctttgaactcctgcctttcctctcaggc 61
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcttcagata--gctgcttcaaacctttgaactcctgcctttcctctcaggc 261
Query: 62 cagtcactcctagcctttagccttgtttctgaattgacagagactgttgcaactctgaat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cagtcactcctagcctttagccttgtttctgaattgacagagactgttgcaactctgaat 321
Query: 122 tgacttttcgaactttatattctagcgagaccgagc 157
||||||||||||||||||||||||| ||||||||||
Sbjct: 322 tgacttttcgaactttatattctagtgagaccgagc 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 557
Length adjustment: 8
Effective length of query: 149
Effective length of database: 549
Effective search space: 81801
Effective search space used: 81801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_d04.g1 MSMg01no128_d04.g1 CHROMAT_FILE:
MSMg01no128_d04.g1 PHD_FILE: MSMg01no128_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:13 2005
(122 letters)
>mm_chr3_142811220_142811741
Length = 522
Score = 228 bits (118), Expect = 8e-65
Identities = 121/122 (99%)
Strand = Plus / Minus
Query: 1 tggttggccaaggaggtacgagaattccgatatctccatctcctcagtaatggattatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tggttggccaaggaggtacgagaattccgatatctccatctcctcagtaatggattatga 263
Query: 61 gtatggaccgtcatatccatctttttatatgagtggtacaaaccatgtcctgactgaaca 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 262 gtatggaccgtcatatccatctttttatatgagtggtagaaaccatgtcctgactgaaca 203
Query: 121 ga 122
||
Sbjct: 202 ga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 122
Length of database: 522
Length adjustment: 8
Effective length of query: 114
Effective length of database: 514
Effective search space: 58596
Effective search space used: 58596
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
