CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAGCGTCTTGACCTCTTGCTTACATTGGATATTAGTCCCCTATCAGATT
TAGGATTGGTAAAAATTCTTTCCCCATCTGTTGGTGGCCTTTTTTGTCTT
ATTGATAGTATCTTTTGCTCTACAGAAGCTTTGCAATTTTATGAGGTCCC
ATTTGTAGATTCTTGATATTACAGTACAGGCCATTGCTGAGGGCTTTCCC
CAATTTCTCCTCGATAAATTTCAGTGTCTCTGGTTTTATGTGGAGTTCTT
TGGTCCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAGTGGATCAATT
CTCATTCTTCTACATGATAACTACCAGTTGTGCCAGCACCATTTGTTGTT
ATGAAATTCTTGGGCAAAGGATGTATCTGGAGGATATCATGCTGAGTTAG
GTAACTCAATCACAAAAGAAGTCACTTGATATGCACTCACTGATAAGTGG
ATATTAGCCCAGAAACCTAGAATACCCAAGATACAACTTCCAAACAACAA
GAAAATCAAGAAGACCAATGCGTAGATAGTTCATTCCTCCCTAGAATAGG
GAATAAAATATCCATGGAAGGAGTTTCAGAGACAAAGTCTGGAGCTAAGA
GGAAAGAATGGACCATCCAGAGACTGCCCCACCCAGGAGTCCATCCCATA
ATCAGCCACCAAACACAG

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAAAAAGAAGATGTATTAAAATAGATTCAA
ATGAGAAAATAAATAATAGGCTAAAGCCCAGAAATATTAAATGTGACAAA
TAAATGACTTATTTAAAAAGATATGTCATCATATTGGGTGAGATAAAGAA
GAATAAAAACTTAGCTTAAGAATTTAGTTCTATGAAAATTATTTATTTAA
AAGAACAAATAGAGAATTGATTCAAGGATAGGTAAGATAAGCTCACAAAT
TTACAGCCCATAATGAAATGAAACAGCATATGGAGTTAAATAATGGATGC
AAACTTCTCAAATTTGAGATAAGAATAAGCCTATGTTAGTGAAGTAAGAC
GGCAGCCAAACACGGAAATCAAGAATGTTCTAGAAAAGAGTGTATAAATT
ATGCAAATATTCAGAGAAAATGTGAGAAACAAAATATGGCACAAACATTG
ATGGTCTCATAATATAGGAAGATATATTAGCAATTTATAAAATTATAAAT
TTAATTTATAAAAATATAAATTATAATTTATAAAATTATAATTTAAATTA
TATTTATAATTTAGCAGGCAACAGGGTGAAATGTTGTTTTTTTCAGTTTA
AATATCAAAGTAATTGTTTACTAGTAATTATTATTAAATTTACTATTAAA

Query= MSMg01no132_c10.g1 MSMg01no132_c10.g1 CHROMAT_FILE:
MSMg01no132_c10.g1 PHD_FILE: MSMg01no132_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:35 2005
         (629 letters)



>mm_chr3_71786869_71787899
          Length = 1031

 Score = 1152 bits (596), Expect = 0.0
 Identities = 620/630 (98%), Gaps = 6/630 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaagaag-atgtattaaaatagattcaaatgagaaaat-aaataataggctaaagccc 58
           ||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 201 aaaaagaagtatgtattaaaatagattcaaatgagaaaataaaatcatagtctaaagccc 260

                                                                       
Query: 59  agaaatattaaatgtgacaaataaatgacttatttaaaaagatatgtcatcatattgggt 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaatattaaatgtgacaaataaatgacttatttaaaaagatatgtcatcatattgggt 320

                                                                       
Query: 119 gagataaagaagaataaaaacttagcttaagaatttagttctatgaaaattatttattta 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagataaagaagaataaaaacttagcttaagaatttagttctatgaaaattatttattta 380

                                                                       
Query: 179 aaagaacaaatagagaattgattcaaggataggtaagataagctcacaaatttacagccc 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagaacaaatagagaattgattcaaggataggtaagataagctcacaaatttacagccc 440

                                                                       
Query: 239 ataatgaaatgaaacagcatatggagttaaataatggatgcaaacttctcaaatttgaga 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatgaaatgaaacagcatatggagttaaataatggatgcaaacttctcaaatttgaga 500

                                                                       
Query: 299 taagaataagcctatgttagtgaagtaagacggcagccaaacacggaaatcaagaatgtt 358
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 taagaataagcctatgttagtgaagtaagacggcagccaaacatggaaatcaagaatgtt 560

                                                                       
Query: 359 ctagaaaagagtgtataaattatgcaaatattcagagaaaatgtgagaaacaaaatatgg 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctagaaaagagtgtataaattatgcaaatattcagagaaaatgtgagaaacaaaatatgg 620

                                                                       
Query: 419 cacaaacattgatggtctcataatataggaagatatattagcaatttataaaattataaa 478
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacaaacattgatggtcacataatataggaagatatattagcaatttataaaattataaa 680

                                                                       
Query: 479 tttaatttataaaaatataaattataatttataaaattataatttaaattatatttataa 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttaatttataaaaatataaattataatttataaaattataatttaaattatatttataa 740

                                                                       
Query: 539 tttagcaggcaacagggtgaaatgttgtttttttcagtttaaatatcaaagtaattgttt 598
           |||||||||||||||||||||||    |||||||||||||||||||||||||||||||||
Sbjct: 741 tttagcaggcaacagggtgaaat----tttttttcagtttaaatatcaaagtaattgttt 796

                                         
Query: 599 actagtaattattattaaatttactattaa 628
           ||||||||||||||||||||||||||||||
Sbjct: 797 actagtaattattattaaatttactattaa 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1031
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1021
Effective search space:   631999
Effective search space used:   631999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)