Query= MSMg01no135_o10.b1 MSMg01no135_o10.b1 CHROMAT_FILE:
MSMg01no135_o10.b1 PHD_FILE: MSMg01no135_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:07 2005
(243 letters)
>mm_chr3_74816509_74817152
Length = 644
Score = 441 bits (228), Expect = e-128
Identities = 237/240 (98%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 1 agtggtgagaa-aaatgtctaaattgtgtgggtcaaaaagaaccatacaatgagaaaata 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtggtgagaacaaatgtctaaattgtgtgggtcaaaaagaaccatacaatgagaaaata 260
Query: 60 gtgagtggatatacctattgaagaattttactagtttattgtaatagaaaagaaataaag 119
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgagtggatatacctatagaagaattttactagtttattgtaatagaaaagaaataaag 320
Query: 120 ataatatgatctatattgcaatggtggctgataaggcagtattctcttccttgtcctgga 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 ataatatgatctatattgcaatggtggctgataaggcagtattctcttccttgtccagga 380
Query: 180 aagacatttgacaatatacagtaagcattattcatacataatcaccttgcttctgtgatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagacatttgacaatatacagtaagcattattcatacataatcaccttgcttctgtgatg 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no135_o10.g1 MSMg01no135_o10.g1 CHROMAT_FILE:
MSMg01no135_o10.g1 PHD_FILE: MSMg01no135_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:07 2005
(294 letters)
>mm_chr3_74952458_74953151
Length = 694
Score = 561 bits (290), Expect = e-164
Identities = 290/290 (100%)
Strand = Plus / Minus
Query: 1 tttgtccaagtctgtatcccattttttaacagggttatttggttctctggagtctaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tttgtccaagtctgtatcccattttttaacagggttatttggttctctggagtctaattt 488
Query: 61 ctgagttcgtcgaatatattgcatgacatttatgtaatattccttagtaagtggagcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctgagttcgtcgaatatattgcatgacatttatgtaatattccttagtaagtggagcttg 428
Query: 121 atttaatcaagacatttcagatgacttttgttttaataataatgatcagtaaccatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atttaatcaagacatttcagatgacttttgttttaataataatgatcagtaaccatttct 368
Query: 181 ttccagttcagttatggcatttttcttttactttacttttttctgtgaatgttgcttata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttccagttcagttatggcatttttcttttactttacttttttctgtgaatgttgcttata 308
Query: 241 tgtatgtatgagcagatgcaaaagtgtgtgtgtgtgtgtgtgtgtgtgtg 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgtatgtatgagcagatgcaaaagtgtgtgtgtgtgtgtgtgtgtgtgtg 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
