TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCTGCGGAATACCGAATGGCTGAGAAACACCTGAAAAAATGTT
CAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CATCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGG
ATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCGTAGA
AAATTGGACATGGTACTACAGGAGGATCCCGCAATACCTCTCCTGGGCAT
ATATCCTGAAGATGTTCCAACTAGTAAGAAAGAAACATGCTCCACTATGT
TCATAGCAGCCTTATTTATAATAGCCAGAAGCTGCAAAGAACCCAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATATGGTACATTTACACAATGGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAAT
GGTTGGACCTGGAGGACATTATCCTGAGTGAGGTAACAGAATCACAAAAG
AACTCAAATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTT
AGTATACCTGAGATATAAGATACAATTTGCAAAACACATGAAACTGAAGA
AGAACGAAGACTAAAGTGTGGA

ACTGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATCAGAAGGCCACCTTTCATGCTGTTATC
ATGGCACTAGGAAGCTGTTGGTTTACAATCTTTGCCAGTACACATGAATA
TGTTCTATTGATTGCAGTTACTGTGATGGTAATTGGTCAGAAGTTATAAC
CAACATCTCACGGTCTGATTCTTAAGAGCAAATTAACAGAAACATTTGAA
ATCAACTATGCTAACAGGATTTCTCTTGATTATAAGAACTTAATAGAAAT
GTTGCAGTGTCATAATGAAAAGAAGCTTACTATTTTGTATTTAAGATATT
TGAATTGAATCCTAAGTCGTTTATGTTTCTAAAAACCATGAATTTTCATA
TTCTTTTAATGATAAGTGCTATGTATTTAGAAAAATCAATATGAAAATTT
AGCTTTAAAGAATTCATGAGGAGAAACATAATAAAATCTTGATATATTAT
ATACAAAAGACAAATCCCTGATCATTTGTTTTTATGCAGATGAGTTTGAT
TTAGACATAATTCCCTAACATCACCATGACTTTCCATCTGTGTAACCTTG
ATGTTCTTAAGCAGGCTGCAGTTACCTCAGGCTCTGGCTATATTCATTCT
GTATGTATGGAGACTGTGACTATCTTAACACTTGAATGATGATAGGAATA
ACAATTGTTTGTTGATT

Query= MSMg01no139_i18.g1 MSMg01no139_i18.g1 CHROMAT_FILE:
MSMg01no139_i18.g1 PHD_FILE: MSMg01no139_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:59 2005
         (646 letters)



>mm_chr3_66939108_66940153
          Length = 1046

 Score = 1232 bits (637), Expect = 0.0
 Identities = 643/645 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcagaaggccacctttcatgctgttatcatggcactaggaagctgttggtttacaatct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcagaaggccacctttcatgctgttatcatggcactaggaagctgttggtttacaatct 260

                                                                       
Query: 61  ttgccagtacacatgaatatgttctattgattgcagttactgtgatggtaattggtcaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgccagtacacatgaatatgttctattgattgcagttactgtgatggtaattggtcaga 320

                                                                       
Query: 121 agttataaccaacatctcacggtctgattcttaagagcaaattaacagaaacatttgaaa 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttataaccaacatctcatggtctgattcttaagagcaaattaacagaaacatttgaaa 380

                                                                       
Query: 181 tcaactatgctaacaggatttctcttgattataagaacttaatagaaatgttgcagtgtc 240
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaactatgttaacaggatttctcttgattataagaacttaatagaaatgttgcagtgtc 440

                                                                       
Query: 241 ataatgaaaagaagcttactattttgtatttaagatatttgaattgaatcctaagtcgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatgaaaagaagcttactattttgtatttaagatatttgaattgaatcctaagtcgtt 500

                                                                       
Query: 301 tatgtttctaaaaaccatgaattttcatattcttttaatgataagtgctatgtatttaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgtttctaaaaaccatgaattttcatattcttttaatgataagtgctatgtatttaga 560

                                                                       
Query: 361 aaaatcaatatgaaaatttagctttaaagaattcatgaggagaaacataataaaatcttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaatcaatatgaaaatttagctttaaagaattcatgaggagaaacataataaaatcttg 620

                                                                       
Query: 421 atatattatatacaaaagacaaatccctgatcatttgtttttatgcagatgagtttgatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatattatatacaaaagacaaatccctgatcatttgtttttatgcagatgagtttgatt 680

                                                                       
Query: 481 tagacataattccctaacatcaccatgactttccatctgtgtaaccttgatgttcttaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagacataattccctaacatcaccatgactttccatctgtgtaaccttgatgttcttaag 740

                                                                       
Query: 541 caggctgcagttacctcaggctctggctatattcattctgtatgtatggagactgtgact 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caggctgcagttacctcaggctctggctatattcattctgtatgtatggagactgtgact 800

                                                        
Query: 601 atcttaacacttgaatgatgataggaataacaattgtttgttgat 645
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atcttaacacttgaatgatgataggaataacaattgtttgttgat 845


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)