Query= MSMg01no147_p05.b1 MSMg01no147_p05.b1 CHROMAT_FILE:
MSMg01no147_p05.b1 PHD_FILE: MSMg01no147_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:41 2005
(344 letters)
>mm_chr3_146223635_146224378
Length = 744
Score = 601 bits (311), Expect = e-176
Identities = 330/337 (97%), Gaps = 2/337 (0%)
Strand = Plus / Plus
Query: 10 cttccaaccttgaccaccttctcccagctaactctcccactgacttgtgtgttggagtga 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cttccaaccttgaccaccttctcccagctaactctcccactgacttgtgtgttggagtga 269
Query: 70 tattcttgtataccgtgtgaagatgtgtctctgtccttccttcgcccgcctaaggcatct 129
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tatttttgtataccgtgtgaagatgtgtctctgtccttccttcgcccgcctaaggcatct 329
Query: 130 tctgattggctaataaaaagcctatggcctattgcaaaaggcaggacagtaaagtgggac 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tctgattggctaataaaaagcctatggcctattgcaaaaggcaggacagtaaagtgggac 389
Query: 190 ttccgggcagagagacaactctggaaaagagtcaggt--ggcaaattccccacccagact 247
|| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 390 tttcgggcagaaagacaactctggaaaagagtcaggtatggcaaattccccacccagact 449
Query: 248 tggaggaagttggatgtatgaaaccgaggactggtaactaaccagccacgtggcacatac 307
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tggaggaagttggatgtatgaaaccgaggactggtaactaaccagccacgtggcacatat 509
Query: 308 agcatagaatcaatgggttaatataagctcagggctc 344
|||||||||| ||||||||||||||||||||||||||
Sbjct: 510 agcatagaataaatgggttaatataagctcagggctc 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_p05.g1 MSMg01no147_p05.g1 CHROMAT_FILE:
MSMg01no147_p05.g1 PHD_FILE: MSMg01no147_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:41 2005
(644 letters)
>mm_chr3_146353137_146354180
Length = 1044
Score = 961 bits (497), Expect = 0.0
Identities = 521/529 (98%)
Strand = Plus / Minus
Query: 1 aggaaaccacaaagttaggaagcacaaaatcctgggctgggaacaactttgagtctgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aggaaaccacaaagttaggaagcacaaaatcctgggctgggaacaactttgagtctgttt 470
Query: 61 aatacataaaactacaattaaatgggtggcatttaattcataaaattaagtgtaatttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aatacataaaactacaattaaatgggtggcatttaattcataaaattaagtgtaatttgt 410
Query: 121 aatcctgaagagaaaacttgcataatataaagaaagctattttgatgctaatgggctaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aatcctgaagagaaaacttgcataatataaagaaagctattttgatgctaatgggctaga 350
Query: 181 aggtggccaccctttgctctactgattgactggggtggagtcatcttggagcatctcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aggtggccaccctttgctctactgattgactggggtggagtcatcttggagcatctcttt 290
Query: 241 attaatgcaaggatattacttggatcagacatgacacttgattgccgcaaaattgtttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 attaatgcaaggatattacttggatcagacatgacacttgattgccgcaaaattgtttga 230
Query: 301 tgaaaagtcttctaaaaacctcttaatagggggctagagacacgcctcagtggttaagag 360
|||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 229 tgaaaagtcttctaaaaacctcttaatagggggctagagagatggctcagtggttaagag 170
Query: 361 cactgactgagccaggcggtggtggcgcacacctttaatcccagcgttcgggaggcagag 420
|||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 169 cactgactgagctaggtggtggtggcgcacacctttaatcccagcgttcaggagatagag 110
Query: 421 gctggcggatttctgagttcgaggccagcctgttctacaaattgagttccaggacagcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gctggcggatttctgagttcgaggccagcctgttctacaaattgagttccaggacagcca 50
Query: 481 gggctacacagagaaaccctgtctcgaaaaacaaacaaacaaacaaaca 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 gggctacacagagaaaccctgtctcgaaaaacaaacaaacaaacaaaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
