TATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAATCCGCGGA
ATTCACAACATAGGTACCTCGATTGGCTGAGAAGCACCTAAAGAAATGTT
CAAAGTCCTTAGTGATCAGAGAAATAGAAATCAAAATGACCCCGAGATTC
TACCTTATACCAATCAGAATGGCTAAGATCAAAACTTCAGGTGACAGCAC
ATGCTGGTGAGGATGTGGAGAAAAAGGAACACTCATCCATTGGAGGTGGG
ATTGCGTTCTTGGATTCGGTTAGCAAGAACTTTATTGAGGAGGTGGGATT
GCAAACTGGTACAACCACTCTGGAAATCAATCTGGAGGTTCCTCAGAAAA
TTGGAAATAGATCTACCTGAAGACCTAGGATTACCACTCTTGTGTATTTA
CCCACAAGATGCCCCACCCTGCCACATGGACACATGTTCCACTATGTTCA
TAGCAAACTTGTTTGTGATAGTCAGAAGCTGGAAACAACCCAGATTTCCC
ATGACAAATGAATGGATACAGAAAATATGATTCTTTTACACAATGGAATA
CTACTCAGCTATTAAGAACAAGGAGATCCTGAGTTTTGCAGGCAATTGTA
TGGAACTAGAAAATATCATCCTGAGTGAGGTATCTCAGACCCAAAAGGAC
TTGCATGGTATGTATTCACTAAGAAGTGGGTATTAGCCAACAAAAACAAC
AACATCAAAAATAAAAACAAACACTACACAA

ATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCTGCAGAGACTTTGTCCCAGTTCCTCCAC
TTGCTCAGGCAGAGCTCAGTAAGAAAAGAAGAGGCAAGGAGATATAAAGA
TTAACAGTAAGGCTAAGTACTGAATATCTTGGGGTTAGCAACAGTATCCT
CATTACCTGGTTTTAGTTTACTTTATTCCTTGTTTCTTTTTTTTTTCTTT
TTTCATTGCATCAGCAAGTACATGTCCTGTTATGTGCTCTTCCTGTTTGT
ACCATGTCCTCTCCTCTCTGTGTATATATATACACACACACACACACACA
CACACACACACACACACACACACACACACACATATATATATATATATGTA
TGTATATATATATGGCCTCCACCTTAGATGGGACTCCTGAGTATGATATT
GAGTGTGTCTCTGATTTTTATGCCTTCTCTTGGATTCTTTTACTTTTGTT
GATTCGCCTTGTCCAACTTTGATGTGATGTGTTTTATTGTGTCTTGCTAT
ACTTGCATTGACTCTACACTGTGGCTCATATTTCTAATAAATATCTGTTT
TGAAATATTAAATTTGTATTAATTCTTCTAGAATTATATACAACACATTT
TGATCAGATTTGCCTCATCTTCTTCTTAACTCTATGTATATAAACCTTCC
CCTGCTTCCCAACGTCATGCTAN

Query= MSMg01no148_h21.g1 MSMg01no148_h21.g1 CHROMAT_FILE:
MSMg01no148_h21.g1 PHD_FILE: MSMg01no148_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:24 2005
         (609 letters)



>mm_chr3_118685274_118686285
          Length = 1012

 Score =  603 bits (312), Expect = e-176
 Identities = 437/528 (82%), Gaps = 79/528 (14%)
 Strand = Plus / Minus

                                                                       
Query: 12  tttgtcccagttcctccacttgctcaggcagagctcagtaagaaaagaagaggcaaggag 71
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tttgtcccagttcctccacttactcaggcagagctcagtaagaaaagaagaggcaaggag 395

                                                                       
Query: 72  atataaagattaacagtaaggctaagtactgaatatcttggggttagcaacagtatcctc 131
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 394 atataaagattaacagtaaggctaagtactgaatatcttggggttagccacagtatcctc 335

                                                                       
Query: 132 attacctggttttagtttactttattccttgtttctttttttttt---cttttttcattg 188
           || |||| |||||||||||||||||||||||||||||||||||||   ||||||||||||
Sbjct: 334 atcacctagttttagtttactttattccttgtttctttttttttttttcttttttcattg 275

                                                                       
Query: 189 catcagcaagtacatgtcctgttatgtgctcttcctgtttgtaccatgtcctctcctctc 248
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 274 catcagcaagtacatgtcctcttatgtgctcttcctgtttgtaccatgtcctctcctctc 215

                                                                       
Query: 249 tgt--gtatatatatacacacacacacacacacacacacacacacacacacacacacaca 306
           |||  |||||||||||                                            
Sbjct: 214 tgtatgtatatatata-------------------------------------------- 199

                                                                       
Query: 307 cacacatatatatatatatatgtatgtatatatatatggcctccaccttagatgggactc 366
                 ||||||||||||||| ||| ||||||||||  |||| ||  |||||||||||||
Sbjct: 198 ------tatatatatatatatatatatatatatata--gccttcagtttagatgggactc 147

                                                                       
Query: 367 ctgagtatgatattgagtgtgtctctgatttttatgccttctcttggattcttttacttt 426
           |||||||||||||                      |||||||||||||||||||||||||
Sbjct: 146 ctgagtatgatat----------------------gccttctcttggattcttttacttt 109

                                                                       
Query: 427 tgttgattcgccttgtccaactttgatgtgatgtgttttattgtgtcttgctatacttgc 486
           ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 108 tgttggttcgccttgtccaactttgatgtgatgcgttttattgtgtcttgctatacttgc 49

                                                           
Query: 487 attgactctacactgtggctcatatttctaataaatatctgttttgaa 534
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48  attgactctacactgtggctcatatttctaataaatatctgttttgaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1012
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1002
Effective search space:   600198
Effective search space used:   600198
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)