Query= MSMg01no151_l02.b1 MSMg01no151_l02.b1 CHROMAT_FILE:
MSMg01no151_l02.b1 PHD_FILE: MSMg01no151_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:34 2005
(368 letters)
>mm_chr3_152080179_152080946
Length = 768
Score = 565 bits (292), Expect = e-165
Identities = 333/364 (91%), Gaps = 28/364 (7%)
Strand = Plus / Plus
Query: 5 gaattctttgctatgcacattagttttcagatttgctgttgaatgcttgaatagcccatg 64
||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgcaatgaagattagttttcagatttgctgttgaatgcttgaatagcccatg 264
Query: 65 aattttattagtacagaaaaacaaccaaagctttgtagcaaggatcgaataaaataaggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattttattagtacagaaaaacaaccaaagctttgtagcaaggatcgaataaaataaggc 324
Query: 125 ttgtttctattttgtgcctttaggaaacaaatagctgtttttaagcacctagaagatata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgtttctattttgtgcctttaggaaacaaatagctgtttttaagcacctagaagatata 384
Query: 185 gttactaaaataagagaattcaaatgaaaatgttgtatttgttataactcaaaagtattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttactaaaataagagaattcaaatgaaaatgttgtatttgttataactcaaaagtattt 444
Query: 245 tctctgcttctgaaggtaatctagcaattgtgtgtgtgtgcctgtgtgtgtgtgtgtgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctctgcttctgaaggtaatctagcaattgtgtgtgtgtgcctgtgtgtg---------- 494
Query: 305 tctgtatgtgtgtgtgtgtgcgcgcatgtgaataaacaaagagcatctcagagttggtct 364
| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 -c-----------------gcgcgcatgtgaataaacaaagagcatctcagagttggtct 536
Query: 365 gagc 368
||||
Sbjct: 537 gagc 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_l02.g1 MSMg01no151_l02.g1 CHROMAT_FILE:
MSMg01no151_l02.g1 PHD_FILE: MSMg01no151_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:34 2005
(342 letters)
>mm_chr3_152262543_152263284
Length = 742
Score = 644 bits (333), Expect = 0.0
Identities = 339/341 (99%)
Strand = Plus / Minus
Query: 1 acacatttattttgaggcttctagatcgtgtggaagattgatggaagtattgacttttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acacatttattttgaggcttctagatcgtgtggaagattgatggaagtattgacttttga 482
Query: 61 ctctagggctcctacataaaataaaagaacaattctggatttaggaaggcgtccctaggg 120
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 481 ctctagggctcctacgtaaaataaaaaaacaattctggatttaggaaggcgtccctaggg 422
Query: 121 aaggagccagagcagacgctagttgcggtgggatataggctgctgtgtgcagttgctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaggagccagagcagacgctagttgcggtgggatataggctgctgtgtgcagttgctggc 362
Query: 181 tctctggtgcagccagtgcagtggaagtgcacagtgagagctacaaattacatgctgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctctggtgcagccagtgcagtggaagtgcacagtgagagctacaaattacatgctgaac 302
Query: 241 tgatgtgtaattaatgagtgggacggacggcatgaacacactctcagtgtgagcaggagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgatgtgtaattaatgagtgggacggacggcatgaacacactctcagtgtgagcaggagt 242
Query: 301 tgtttaagcctcattcatgtgggttgaataagctcttttgc 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtttaagcctcattcatgtgggttgaataagctcttttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
