CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGCGGAATTC
CAAGACCAGCTTGGTGTCTGTGCATGCTGTGTCAGGACTATGTTGGGTAC
TTCTTGTTCCAGGTTAGCAGAAGAAACAGGAGTCTCAATTTAAGAGAAGA
CCTTCATTAAAGAATAGGCCATAGGAATAAAATACACTAAATTGCTGTCT
ACTATTGTACCCTAAGTTGAATCTTCTTTTAAATTAATATTTTTAGTATG
ATATATAGCATATGCATCAGAGAATCGCAAATCTTTAACACAGAATAACC
ATTATTTTAAGCTTCAGCTACAGGAAGTAGTTTCACATGATATAGTATTG
AATTTCATGGAAGCACAAAATAACTAATCGTTTCTGTTACCTTTACAGTA
ACAGAATTCACTGTGTGATTCCCAAGCTGTTCTTTACCTGAAGCAATAGC
CCAGCCTTGACAGTAGCAGCAGGAAAATCTCCAGGAACTGCTCTAAGAAT
TGGGAGAGGGGCAGAGCCCAAGGCTTCTGTTGGAGCCCAGCTGTGGCTTC
CCTCAGTAGCCTGCCACAGGAGTTACTGCCAGTGCTTTGTGTGTCTTACC
ATTCTTTCTAGTAGTTTTATAACTGTGCTCAACATTCCTATTACAAACTT
CTTTTTGAGGATTTGTATAAAGTCAGTACGTCAACTGTTTGTGTAAN

CGAATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGAGG
AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGTCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAA
TCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCC
AGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTTGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAAGAACTCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGGATCATCCTGAGT
GAGGTAACACATTCACAAAGGAACTCACACAATATGTACACCCTGATATG
TGGATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTGC
TAC

Query= MSMg01no154_c10.b1 MSMg01no154_c10.b1 CHROMAT_FILE:
MSMg01no154_c10.b1 PHD_FILE: MSMg01no154_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:42 2005
         (552 letters)



>mm_chr3_44161796_44162747
          Length = 952

 Score = 1000 bits (517), Expect = 0.0
 Identities = 535/541 (98%), Gaps = 2/541 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  aagaccagcttggtgtctgtgcatgctgtgtcaggactatgttgggtacttcttgttcca 72
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aagaccagcttggtgtctgtgcatgctgtgtcaggactatgttgggtacttcttgttcca 272

                                                                       
Query: 73  ggttagcagaagaaacaggagtctcaatttaagagaagaccttcattaaagaataggcca 132
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggttagcagaagaaacaagagtctcaatttaagagaagaccttcattaaagaataggcca 332

                                                                       
Query: 133 taggaataaaatacactaaattgctgtctactattgtaccctaagttgaatcttctttta 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 333 taggaataaaatacactaaattgctgtctactattgtaccctaagttgaatctgcgttta 392

                                                                       
Query: 193 aattaatatttttagtatgatatatagcatatgcatcagagaatcgcaaatctttaacac 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aattaatatttttagtatgatatatagcatatgcatcagagaatcgcaaatctttaacac 452

                                                                       
Query: 253 agaataaccattattttaagcttcagctacaggaagtagtttcacatgatatagtattga 312
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agaataatcattattttaagcttcagctacaggaagtagtttcacatgatatagtattga 512

                                                                       
Query: 313 atttcatggaagcacaaaataactaatcgtttctgttacctttacagtaacagaattcac 372
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atttcatggaagcacaaaataactaatcgtttctgttacctttacagtaacagaattcac 572

                                                                       
Query: 373 tgtgtgattcccaagctgttctttacctgaagcaatagcccagccttgacagtagcagca 432
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tgtgtgattcccaagctgttctttacctgaagcaatagcccagccttgacagtagcagca 632

                                                                       
Query: 433 ggaaaatctccaggaactgctctaagaat-tgggagaggggcagagcccaaggcttctgt 491
           ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 633 ggaaaatctccaggaactgctctaagaatctgg-agaggggcagagcccaaggcttctgt 691

                                                                       
Query: 492 tggagcccagctgtggcttccctcagtagcctgccacaggagttactgccagtgctttgt 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tggagcccagctgtggcttccctcagtagcctgccacaggagttactgccagtgctttgt 751

            
Query: 552 g 552
           |
Sbjct: 752 g 752


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space:   510564
Effective search space used:   510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)