Query= MSMg01no155_a21.b1 MSMg01no155_a21.b1 CHROMAT_FILE:
MSMg01no155_a21.b1 PHD_FILE: MSMg01no155_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:52 2005
(612 letters)
>mm_chr3_84539199_84540210
Length = 1012
Score = 1145 bits (592), Expect = 0.0
Identities = 604/608 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaccctctatgccctgcgctctgggccatggtcctaccctatgctcttagtaga 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaccctctatgctctgcgctctgggccatggtcctaccctatgctcttagtaga 264
Query: 65 atccctacatcataacatcacaccacacacaccctggcatcacccaggcctgcagatcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atccctacatcataacatcacaccacacacaccctggcatcacccaggcctgcagatcca 324
Query: 125 ggagcaaaagtagagttgcttcttccatctccttcacagaagagcatcagggctagtcat 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggagcaaaagtagagttgtttcttccatctccttcacagaagagcatcagggctagtcat 384
Query: 185 tccaatgcttatttcatgccctgtcaacaccggctcactcttatctccattagccacgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccaatgcttatttcatgccctgtcaacaccggctcactcttatctccattagccacgta 444
Query: 245 ttggactgaatcagggtatcccattaaagggggcagagggagtaggggaaggagccagac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttggactgaatcagggtatcccattaaagggggcagagggagtaggggaaggagccagac 504
Query: 305 tgacaaacgcatagaaggaatgctggatgcagatattcatcataagtgagcaacagcagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgacaaacgcatagaaggaatgctggatgcagatattcatcataagtgagcaacagcagc 564
Query: 365 cttaaagggctcccagtgtgatccaattagctctgggcgagtcctcctgtgttagctgct 424
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 cttaaagggctcccagtgtgatccaattagctccgggcgagtcctcctgtgttagctgct 624
Query: 425 gctctacggagtcagaaatgcacgggctgttcaggcggccttgacacttcttcctgtacc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctctacggagtcagaaatgcacgggctgttcaggcggccttgacacttcttcctgtacc 684
Query: 485 tcgagcgagcggacgccaacagttaacttaatgtgagggtgtggcttgccagtaaattac 544
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttgagcgagcggacgccaacagttaacttaatgtgagggtgtggcttgccagtaaattac 744
Query: 545 ttcaaatttagtgacacatcaataatgcccagaagctacatgcactgcagaagtgaagtc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttcaaatttagtgacacatcaataatgcccagaagctacatgcactgcagaagtgaagtc 804
Query: 605 tggcatgc 612
||||||||
Sbjct: 805 tggcatgc 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_a21.g1 MSMg01no155_a21.g1 CHROMAT_FILE:
MSMg01no155_a21.g1 PHD_FILE: MSMg01no155_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:52 2005
(214 letters)
>mm_chr3_84623507_84624124
Length = 618
Score = 377 bits (195), Expect = e-109
Identities = 212/221 (95%), Gaps = 7/221 (3%)
Strand = Plus / Minus
Query: 1 aaacaaaggatcataatgat----tgtttttattcacaatcttttatccttatcaaagcc 56
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacaaaggatcataatgattacgtgtttttattcacaatcttttatccttatcaaagcc 262
Query: 57 aataccaaaagctaaccataaagatgcctgaatagtcttttttgttcgtt---ttgttgt 113
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 aataccaaaagctaaccataaagatgcctgaatagtcttttttgttcgttttgttgttgt 202
Query: 114 tgttttgtttgtttttttcaagaccaggtttagctgtgttgctttggctgccctgcaact 173
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 201 tgttttgtttgtttttttcaagaccaggtttagctgtgttgctttggctgtcctgtaact 142
Query: 174 cactctgtagactaggctggccttgaactcagagctacctg 214
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cactctgtagactaggctggccttgaactcagagctacctg 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 618
Length adjustment: 9
Effective length of query: 205
Effective length of database: 609
Effective search space: 124845
Effective search space used: 124845
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
