TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAATATATGTTTAAAAAAATCCCAATTCTGATAAATAACAAGAAAA
AACTCCATTTTTACATATGTCCCTAGGTTCTAGTCACTGTTTCTATTTGT
GACAGTTATGTGACACAGGCACGAGGAAGTAGGCAGTAACACTGCTGACT
TGTTCAAAACTCAACTTGAATTCTACTACTTTTCTATCTTAGTATTCTCA
TCTAGTCTATGAATTTTAAACATTTTCCATCTCAAACGAGTTATCTTTTT
ATGACCAGCTGGCAAGTTTTAATGATAAAAGGAAGTGGCACTGACGATGC
CTCATGAAAATAGTCCAGTCTAAACTCTAATGCTGCTGCTACATGCACAC
TCAACTCCTGGTTGTCATCTATTCTAGCGTCACTGTACTCTGGAAGGTGC
CGCAGTACTATGCACCACTATATACTATACACTATGGTATATACTCTATA
CAAGTTCTGCAACACCACAAGAGAAACATCTAATAAAGGCAGAACTTTAG
GAGACTTACATAAGTGAAGCACAGGCTTAGAATACACTAGAATGTCTTAT
AATTTCAAAAAACCTTTTTGGTAAAGTCCCCCCTTTGCTTTCTTTTGAGC
TTTTAAGCCTTTCATTTAAAAATACATTACCAATTCAATTAACAAAAAGT
ACAATATATGTTTTTAAAATCAAGTCTTCTCATGGTATTTTCTAC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTAGAGAATGGATAAACCTACAT
AAATTTCTTAGAATTAATGTCTGGCATAGGGTAAGAACCCTGTTGAGGAT
ACCTAATAATTAATATATCTTATGTAGCAAATATTTATTAGTAGTAACCT
AGTTGAAGCAATTTTGAGACAGTATCTCCTAGTTCTCAGTTAACATCTTT
GAAATTCAGTTCTAGTTTTCTTTTGGGGAGAGTAGGTGTAGTAGAATCAC
TCATTCTAATATAAGTCCATGCATGCACATGTATACATGAATACGCAGGT
TGAGTTGAATTGCCTCATGAAGGTTTGTCTGTGTAGTACATGCACAATAT
ACATTTACCGAATGCCTGGTTGTGTTGGCTCTTTTCTCTGCCAGCAGTTT
CCATGTTAACCCAAAGCTAGAGTCATCTGAGAGGAGCGAACCACAATTGA
GAAAATGCTTCCATTTGATTGGGCTATAGTCAAGCACATCTTCTCAATTA
GTGATTTATAGCAGAGGGCCTGGTCCATTGTTGGTATGGATACCCCTAGA
CTGGTGGTCCTGGGTTCTATAAGAAAGAAGGCTTAGCAAGCACCCCTTCA
TGATCTCTGCATTAGCTCCTGCCTCCAGGTTTCTGCCCTGTTTTAGTTCC
TTCTTTGATTTCCTTCACTGATGAATTGGAATTCATCAATGAATGAATT

Query= MSMg01no155_h24.b1 MSMg01no155_h24.b1 CHROMAT_FILE:
MSMg01no155_h24.b1 PHD_FILE: MSMg01no155_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:25 2005
         (630 letters)



>mm_chr3_141936101_141937127
          Length = 1027

 Score = 1141 bits (590), Expect = 0.0
 Identities = 619/630 (98%), Gaps = 3/630 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaattcaatatatgtttaaaaaaatcccaattctgataaataacaagaaaaaactccatt 60
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcaatataggtttaaaaaaatcccaattctgataaataacaagaaaaaactccatt 260

                                                                       
Query: 61  tttacatatgtccctaggttctagtcactgtttctatttgtgacagttatgtgacacagg 120
           ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tttacgtacgtccctaggttctagtcactgtttctatttgtgacagtcatgtgacacagg 320

                                                                       
Query: 121 cacgaggaagtaggcagtaacactgctgacttgttcaaaactcaacttgaattctactac 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgaggaagtaggcagtaacactgctgacttgttcaaaactcaacttgaattctactac 380

                                                                       
Query: 181 ttttctatcttagtattctcatctagtctatgaattttaaacattttccatctcaaacga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttctatcttagtattctcatctagtctatgaattttaaacattttccatctcaaacga 440

                                                                       
Query: 241 gttatctttttatgaccagctggcaagttttaatgataaaaggaagtggcactgacgatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttatctttttatgaccagctggcaagttttaatgataaaaggaagtggcactgacgatg 500

                                                                       
Query: 301 cctcatgaaaatagtccagtctaaactctaatgctgctgctacatgcacactcaactcct 360
           ||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 501 cctcatgaaaacagtccagtctaaactctaatgctgct---acatgcacactcaactcct 557

                                                                       
Query: 361 ggttgtcatctattctagcgtcactgtactctggaaggtgccgcagtactatgcaccact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ggttgtcatctattctagcgtcactgtactctggaaggtgccgcagtactatgcaccact 617

                                                                       
Query: 421 atatactatacactatggtatatactctatacaagttctgcaacaccacaagagaaacat 480
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 618 atatactatacactatggtatacactctatacaagttctgcaacaccacaagagaaacat 677

                                                                       
Query: 481 ctaataaaggcagaactttaggagacttacataagtgaagcacaggcttagaatacacta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctaataaaggcagaactttaggagacttacataagtgaagcacaggcttagaatacacta 737

                                                                       
Query: 541 gaatgtcttataatttcaaaaaacctttttggtaaagtcccccctttgctttcttttgag 600
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gaatgtcttacaatttcaaaaaacctttttggtaaagtcccccctttgctttcttttgag 797

                                         
Query: 601 cttttaagcctttcatttaaaaatacatta 630
           ||||||||||||||||||||||||||||||
Sbjct: 798 cttttaagcctttcatttaaaaatacatta 827


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1027
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1017
Effective search space:   630540
Effective search space used:   630540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)