TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCAAGAATGTGACTAAATCTTGAAAATAATGATGGAGTACAGTCTGAC
TCCAGCCTTAATCTGTCAACCCTAAAAAAAAAAAAAAAAAAAAAAAAATC
CTGTGCAGACTTAGCCATACAATGGGGAGAATCGCAACATCTTTTCTCAC
AGTAACGTTTTTATGTGTTGACAAATTCTTCAAACACTTGGAAAACTGAA
GTAAGGGAAATCCTACGAAGTTCTCTGAATATCTTTCTGCTAAGTTTCTC
AGCACCGTCTAGTTAGTGTTCTAAGTCTTACACAGCCCCCTTACCACTGT
CTAAAAATAGATGTGACCTACCAAAGTCTGGCTATGGTGTGCTGTAGGCA
AGTTTCAGTGCTGCGCCCGCCAGCAAACCTAGATGATTTTAAAATTGATT
TATAGGTTCTGGAAATAACTACTTTGATTCGGTTTTACTTTAGAAGAAAT
ATCTCTGTCAGAAGGATACACTATCCCATACTCCCTTTCTTGTCAGCTTT
ATGTCCCTAGCAACCACCTGGTATTTAATGCCAAATTGGGAGCATCCAGT
GTGTTCTGAGTTCTCTCCATATCTAAAAAGGTGGTTACGAGAAGGGGCTA
TATTTGTAATCATATCTGGATGCTACTTTTTGGTTTGCACTGACTCTTAA
TATCCATGCCCCCCCCCCTTTAACTGTAAAATAAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTAAGGAATACTGAATGCCT
GAGAAGCACCTGAAAAAATTTTCAGCATCCTTAATCAGCAGAAAAATGCA
AATCAAAGCATCCCTGAGATTCCAACTCATATCAGTCAGAATGCCTCAGA
ACAAAAACTCAGGTGACAGAAGATTCTGTCGAGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGATTGCAAGTTTGTACAACCACTCTGGAA
ATCAGTCTGGTGTTTCCTCAGAAAATTGTACTACATAGTACTGGAGTATC
TAGCAATACCTCACCTAGGTATATATCCAGAAGATGTTCCAACTGGTAAG
AAGGACACATCCTCCACTATGCCCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAATAACCCAGATGTCCCTCTACAGAGGAATGGATACAGAAAA
TGTGGTACATTTACAAAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCACTGATAC
GTGGATAGTAGCCCAGGAACTTAGAATACCCAAGATTTAAGATACAACTG
GAAAACATGAAACTCAATAAGAAGGAAGACCAAAGTGG

Query= MSMg01no155_i20.b1 MSMg01no155_i20.b1 CHROMAT_FILE:
MSMg01no155_i20.b1 PHD_FILE: MSMg01no155_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:29 2005
         (683 letters)



>mm_chr3_126487402_126488485
          Length = 1084

 Score = 1178 bits (609), Expect = 0.0
 Identities = 659/681 (96%), Gaps = 10/681 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccaagaatgtgactaaatcttgaaaataatgatggagtacagtctgactccagc 63
           ||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 213 ggaattccaagaatgagagtaaatcttgaaaataatgatggagtagagtctgactccagc 272

                                                                       
Query: 64  cttaatctgtcaaccctaaaaaaaaaaaaaaaaaaaaaaaaatcctgtgcagacttagcc 123
           ||||||||||||||||||||||||||||||| |         ||||||||||||||||||
Sbjct: 273 cttaatctgtcaaccctaaaaaaaaaaaaaata---------tcctgtgcagacttagcc 323

                                                                       
Query: 124 atacaatggggagaatcgcaacatcttttctcacagtaacgtttttatgtgttgacaaat 183
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 324 atacaatggggagaatcgcaacatcttttctcacagtaacatttttatgtgttgacaatt 383

                                                                       
Query: 184 tcttcaaacacttggaaaactgaagtaagggaaatcctacgaagttctctgaatatcttt 243
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcttcaaacagttggaaaactgaagtaagggaaatcctacgaagttctctgaatatcttt 443

                                                                       
Query: 244 ctgctaagtttctcagcaccgtctagttagtgttctaagtcttacacagcccccttacca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgctaagtttctcagcaccgtctagttagtgttctaagtcttacacagcccccttacca 503

                                                                       
Query: 304 ctgtctaaaaatagatgtgacctaccaaagtctggctatggtgtgctgtaggcaagtttc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgtctaaaaatagatgtgacctaccaaagtctggctatggtgtgctgtaggcaagtttc 563

                                                                       
Query: 364 agtgctgcgcccgccagcaaacctagatgattttaaaattgatttataggttctggaaat 423
           |||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agtgctgcgtttgtcagcaaacctagatgattttaaaattgatttataggttctggaaat 623

                                                                       
Query: 424 aactactttgattcggttttactttagaagaaatatctctgtcagaaggatacactatcc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aactactttgattcggttttactttagaagaaatatctctgtcagaaggatacactatcc 683

                                                                       
Query: 484 catactccctttcttgtcagctttatgtccctagcaaccacctggtatttaatgccaaat 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 684 catactccctttcttgtcagctttatgtccctagcaaccacctggtatttaatgccaaac 743

                                                                       
Query: 544 tgggagcatccagtgtgttctgagttctctccatatctaaaaaggtggttacgagaaggg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgggagcatccagtgtgttctgagttctctccatatctaaaaaggtggttacgagaaggg 803

                                                                       
Query: 604 gctatatttgtaatcatatctggatgctactttttggtttgcactgactcttaatatcca 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gctatatttgtaatcatatctggatgctactttttggtttgcactgactcttaatatcca 863

                                
Query: 664 tgc-ccccccccctttaactg 683
           ||| |||||||||||||||||
Sbjct: 864 tgcgccccccccctttaactg 884


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1084
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1074
Effective search space:   722802
Effective search space used:   722802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)