XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAG
ATCATTATTTTTGTGGGTGCACATGGCATATGAAATACTGCTCTAAACGT
TAAAAACAGATAGATTCACTGACACCTGTCATATCCTTTTTAATAATCTT
TCTAAGAGAGAGAGAAAAAGAGAATTTATAACAGCAGAGATAAACAAAGC
TAAGCTCACATACTTTCATTGGTAAAAAATCTGACAGATTTACTTGTGAG
TGTTTGCAGGACAGAGTGCAAAATCAAGAGGCAGTTTTGTCATCAACTTT
TCTTGGTAACTGGCTAGTCTATGGATTTATGTCATCTAGTTCAATGTTTG
TTGGCCAGATCCTTACACCCACAGACATTTTCCTCACACCCTCTATGCTC
CTTTGAAACTTTTTGATAACATAATACCACATAAAGATCTTTATGTTTGA
AGTTATACGTGATCTAGGAATTCCATCTGTAAAACTGAAAAAGTGTGTGC
TGTCAAAGAAGCACACATGATCACCACATTTTGATACCTGAAGTGGTAGC
ATGATAATAACTGTGTAAAACAGCGACTTCCTTCTCTCAAAATAATTACG
GCTCTCTAGAAACCAGCATCTGTGCTGCCAGATGTTTCTGTCAAACACAT
AAGCAATGGGTTTGAACACTGTGCATGTCTGGCTGCTATCCAATAGCCTA
TTATTACTGCAGAAGTGGTGGCTTTCTGGAGTCCAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCAGACATGAGCACTAGACAGTCAGAATATCTGT
CAGTTCCCAGAACTTTATGAGGTTCCATGTGGGACCAGAGGCTCAGACTG
AGAGACCTGCCTATCAAGATTGACTTTATTCTTGAAGTCACAAAGTGGAC
AGTGACTCTGGACTTATAGTTCTTGAACACTACCATCAGCATAGCCTTGG
AATCCACCAGAAATTAAAATACGCACTCTTCACTTTCAAATCCAATAAGG
CAGCATCTCTGAGAGTGGCACCTCACAATCTGTTGTAATGATTCGTTAGA
GGGTTGTCTGCACGTCTAGCCTGAAAGGCCCTGGAACAGAGAAAAGGGAG
TGGAGGCTAATATCAAGCTTTTATGGTGAGCAGCCACAAAAGAACTGCAA
GGTTCACAGCACCTTTCTGGAAGAAATCTGAGAAATCAGAAGTAAACATG
ACAAGGTTGAGTGCACTTACCATAGGTCAAGTGCTTATAGTTAAAGGAAA
AGGTAATATACTTAAGAACAAGAATAAAGGCTGGCATGCCTAGTTACCAA
CCACTATTGAACCAAATGCAGTTCAAAGCAACAAACAAAACATCTCTGGA
CATACCATTAATCAGTGGTGTTTACATGTTTGGGAAATACCTGGAGATGT
GATTTATTTTAGTCAGCTTCGTGGTGATAACATTAN

Query= MSMg01no157_j16.b1 MSMg01no157_j16.b1 CHROMAT_FILE:
MSMg01no157_j16.b1 PHD_FILE: MSMg01no157_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:58 2005
         (329 letters)



>mm_chr3_24413184_24413912
          Length = 729

 Score =  611 bits (316), Expect = e-179
 Identities = 322/324 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccagatcattatttttgtgggtgcacatggcatatgaaatactgctctaaacgtt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagatcattatttttgtgggtgcacatggcatatgaaatactgctctaaacgtt 264

                                                                       
Query: 65  aaaaacagatagattcactgacacctgtcatatcctttttaataatctttctaagagaga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaaacagatagattcactgacacctgtcatatcctttttaataatctttctaagagaga 324

                                                                       
Query: 125 gagaaaaagagaatttataacagcagagataaacaaagctaagctcacatactttcattg 184
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 gagaaaaagagaatttataacagctgagataaacaaagctaagctcacatactttcattg 384

                                                                       
Query: 185 gtaaaaaatctgacagatttacttgtgagtgtttgcaggacagagtgcaaaatcaagagg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtaaaaaatctgacagatttacttgtgagtgtttgcaggacagagtgcaaaatcaagagg 444

                                                                       
Query: 245 cagttttgtcatcaacttttcttggtaactggctagtctatggatttatgtcatctagtt 304
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 445 cagttttgtcatcaacttttcttggtaactggctagcctatggatttatgtcatctagtt 504

                                   
Query: 305 caatgtttgttggccagatcctta 328
           ||||||||||||||||||||||||
Sbjct: 505 caatgtttgttggccagatcctta 528


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space:   230400
Effective search space used:   230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no157_j16.g1 MSMg01no157_j16.g1 CHROMAT_FILE:
MSMg01no157_j16.g1 PHD_FILE: MSMg01no157_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:59 2005
         (651 letters)



>mm_chr3_24566855_24567905
          Length = 1051

 Score = 1031 bits (533), Expect = 0.0
 Identities = 572/585 (97%)
 Strand = Plus / Minus

                                                                        
Query: 67   accagaggctcagactgagagacctgcctatcaagattgactttattcttgaagtcacaa 126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 accagaggctcagactgagagacctgcctatcaagattgactttattcttgaagtcacaa 992

                                                                        
Query: 127  agtggacagtgactctggacttatagttcttgaacactaccatcagcatagccttggaat 186
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991  agtggacagtgactctggacttatagttcttgaacactaccatcagcatagccttggaat 932

                                                                        
Query: 187  ccaccagaaattaaaatacgcactcttcactttcaaatccaataaggcagcatctctgag 246
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 931  ccaccagaaattaaaatacgcactcttcactttcaaacccaataaggcagcatctctgag 872

                                                                        
Query: 247  agtggcacctcacaatctgttgtaatgattcgttagagggttgtctgcacgtctagcctg 306
            |||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| |||
Sbjct: 871  agtggcacctcacagtctgttgtaatgatttgttagagggttgtctgcatgtctagtctg 812

                                                                        
Query: 307  aaaggccctggaacagagaaaagggagtggaggctaatatcaagcttttatggtgagcag 366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 811  aaaggccctggaacagagaaaagggagtggaggctaatatcaagcttttatggtgagcaa 752

                                                                        
Query: 367  ccacaaaagaactgcaaggttcacagcacctttctggaagaaatctgagaaatcagaagt 426
            ||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 751  ccataaaagaactgcaagcttcacagcacctttctgcaagaaatctgagaaatcagaagt 692

                                                                        
Query: 427  aaacatgacaaggttgagtgcacttaccataggtcaagtgcttatagttaaaggaaaagg 486
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 691  aaacatgacaaggttgagtgcacttatcataggtcaagtgcttatagttaaaggaaaagg 632

                                                                        
Query: 487  taatatacttaagaacaagaataaaggctggcatgcctagttaccaaccactattgaacc 546
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 631  taatatacttaagaacaagaataaaggctggcatgcctagttaccaaccattattgaacc 572

                                                                        
Query: 547  aaatgcagttcaaagcaacaaacaaaacatctctggacataccattaatcagtggtgttt 606
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 571  aaatgcagttcaaagcaacaaacaaaacatctctggacataccattaatcagtgatggtt 512

                                                         
Query: 607  acatgtttgggaaatacctggagatgtgatttattttagtcagct 651
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511  acatgtttgggaaatacctggagatgtgatttattttagtcagct 467


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space:   667281
Effective search space used:   667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)