Query= MSMg01no161_i20.b1 MSMg01no161_i20.b1 CHROMAT_FILE:
MSMg01no161_i20.b1 PHD_FILE: MSMg01no161_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:17 2005
(390 letters)
>mm_chr3_150251258_150252047
Length = 790
Score = 615 bits (318), Expect = e-180
Identities = 371/396 (93%), Gaps = 13/396 (3%)
Strand = Plus / Plus
Query: 1 ggaattgataagaaagcaggg------------agacagacagacagacagacagagagg 48
||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 190 ggaattgataagaaagctgggagacagacagacagacagacagacagacagacagagagg 249
Query: 49 ccatgagcacaaaaagagagaggggaggggaatggggaagagagggggagcaagagcaag 108
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 250 ccatgagcacaaaaagagagaggggaggggaatgggg-agagagggggagcaggagcaag 308
Query: 109 agaacagggcaagagaaagaaggcaagacagtgaggaggggcaagcagtcccttcttata 168
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 309 aggacagggcaagagaaagaaggcaagagagtgaggaggggcaagcagtcccttcttata 368
Query: 169 ctgagtcaggcccacctgactattgctaggtaactgtggggcagagcctagactaaatgc 228
|||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||
Sbjct: 369 ctgagtcaggcccacctggctgttgctaggtaactgtggggcggagcctagactaaatgc 428
Query: 229 caacagaatctttgtgtgaaatctgagtatgtaagcaaacagctgcatcacaatggcatt 288
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 caacagaagctttgtgtgaaatctgagtatgtaagcaaacagctgcatcacaatggcatt 488
Query: 289 aatttgatttagggctgtgttggaggtgatggtttttatcactgttttaagaagaagaag 348
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||
Sbjct: 489 aatttgatttagggctgtgttggaggtgatggttttgatcactgatttaagaagaacaag 548
Query: 349 gctgaatttcttgtgaatttagcagttttctctttt 384
|||||||||||||||||||||||||||||||||||
Sbjct: 549 actgaatttcttgtgaatttagcagttttctctttt 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_i20.g1 MSMg01no161_i20.g1 CHROMAT_FILE:
MSMg01no161_i20.g1 PHD_FILE: MSMg01no161_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:17 2005
(326 letters)
>mm_chr3_150361554_150362279
Length = 726
Score = 594 bits (307), Expect = e-174
Identities = 324/333 (97%), Gaps = 7/333 (2%)
Strand = Plus / Minus
Query: 1 ctacatttaaattgaaatacagaattgatgacatatttttcctctta-aactgtaatttt 59
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 655 ctacatttaaattgaaatacagaattgatgacatatttttcctcttacaactgtaatttt 596
Query: 60 atctttcctcaatagctattgaatgtgtgtgtgtgtgtgtgtgtgtgtgtg------tgt 113
||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 595 atctttcctcaatagctattgaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgt 536
Query: 114 gtgtgtgtgatagcatattattatgatgatgaacatatggaaagaaattataatcatatc 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gtgtgtgtgatagcatattattatgatgatgaacatatggaaagaaattataatcatatc 476
Query: 174 agtaattgcaatatttaaaattgattacaaccctctgtcatcctctttactcttttgtct 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agtaattgcaatatttaaaattgattacaaccctctgtcatcctctttactcttttgtct 416
Query: 234 taaaactccatctctagatttctctgtcttctgcatttggtgtcaaaaaaaccaaaggcc 293
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 415 taaaactccatctctagatttctctgtcttctgcatttggtgtcagaaaaaccaaaggcc 356
Query: 294 tttggtgcccatgagtaataaaactggtaaata 326
||||||||||||||||||||||||||||||||
Sbjct: 355 attggtgcccatgagtaataaaactggtaaata 323
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 12
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
