Query= MSMg01no162_h13.b1 MSMg01no162_h13.b1 CHROMAT_FILE:
MSMg01no162_h13.b1 PHD_FILE: MSMg01no162_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:51 2005
(316 letters)
>mm_chr3_61518773_61519488
Length = 716
Score = 536 bits (277), Expect = e-157
Identities = 298/315 (94%), Gaps = 16/315 (5%)
Strand = Plus / Minus
Query: 1 ctaactctccaagtatgaggcaaaataaaaccttcatcccttaagagtcttcctattaga 60
||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 593 ctaactctccaagtatgaggcaaaa----------------taagagtcttcctattaga 550
Query: 61 tattttgccatgtcagtgagtaaaattaactaatgtagggacactatgacaaaattatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tattttgccatgtcagtgagtaaaattaactaatgtagggacactatgacaaaattatat 490
Query: 121 gctgtctgacatttaacaagaaaggacatcagagaggacctaagagtatgtattttagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gctgtctgacatttaacaagaaaggacatcagagaggacctaagagtatgtattttagag 430
Query: 181 tctacactaggactataacagagatagtacccaaaggataaatccttcctttctaatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tctacactaggactataacagagatagtacccaaaggataaatccttcctttctaatgca 370
Query: 241 aataaaatattaagccccatccaagtaattacaacccttgacaatgtgttaacataatta 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 369 aataaaatattaagccccatccaagtaattacaacccctgacaatgtgttaacataatta 310
Query: 301 taagagaaagatatc 315
|||||||||||||||
Sbjct: 309 taagagaaagatatc 295
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_h13.g1 MSMg01no162_h13.g1 CHROMAT_FILE:
MSMg01no162_h13.g1 PHD_FILE: MSMg01no162_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:51 2005
(288 letters)
>mm_chr3_61431213_61431900
Length = 688
Score = 540 bits (279), Expect = e-158
Identities = 282/283 (99%)
Strand = Plus / Plus
Query: 1 tatttgggcagcattacttttttattaatttttatatttattctgatgttatagaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatttgggcagcattacttttttattaatttttatatttattctgatgttatagaataaa 260
Query: 61 atgctggtgtgattttgttccttttttctgaagagactaatctgttagcatcatttctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgctggtgtgattttgttccttttttctgaagagactaatctgttagcatcatttctgg 320
Query: 121 ttaatttcacttagactagtatgttctaccaagagaacctatcacaaaccccagaatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaatttcacttagactagtatgttctaccaagagaacctatcacaaaccccagaatgga 380
Query: 181 gggcaagataaatattttgaccaacgcatattgaaggaatacagagtatgtgacgtcttc 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gggcaagataaatattttgaccaacgtatattgaaggaatacagagtatgtgacgtcttc 440
Query: 241 aactaatttctgggaaaagaacatatgactaaagtgtctcata 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactaatttctgggaaaagaacatatgactaaagtgtctcata 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
