NCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCC
GCGGAATTCTCACCTGAGTAACAGCAAATGGCAGAGAAGCACCTGAAAAA
ATGTTAAACATCCTTACTCATCAGGGAAATGCAAATCAAAACAACCCTGA
GATTCTACCTCACACCAGTCAGAATGGCTAAGATCAAAAACTCAGGTGAC
AGCAGATTCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTG
GCGGGATTGCAGGCTTGTTCAACCACTCTGGAAATCAGTCTGGCGGTTCC
TCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTG
GGCATATATCCAGAAGATGTCCCAACCGGTATGAAGGACACATGCTCCAC
TATGTTCATAGTTATCTTATTTACCCCCCCCAGAATTTGGAAAGAACCCA
GATGCCCCTCTATAGAGGAACAGATACTGAAAATGTGGCACATCTACACA
CCGCATTATTACTCAGCTATTACCAAGAATGAATCTATGAAATTGCTAGC
CCACTGTATGTACCTGGCAGGTATCCTCCTGCTTGAGGCTTTCACTTTTT
CACGCTTATTTCCCCTTTTTGCCTCCCTGCCTTTTTTTTCCCCCCCCCTC
CCCCCCTTGTTATCCCTCCTATTTTTTATTACCCTTTCGCCCCATCCCCC
TGTTTCCCCCCCCCTCATTGTTTCATATGCCCCCTTTGTTCCCCCC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAAGGAATCAGTGGGACACTATGT
GTAATAATGGATGGGCTTAATTAAGGAGAAAAACTAGAGCAGTTGCTCTA
GTCAAAAGTGTCCTCTATGGTTGACCTAGATGTCTCAGTAGTTTAAGAGC
ACTGGTTGCTCTTCCAAAGTCCTGGTTTCAATTCCCAGCACCCACATGGT
TGGTCATAACGCCCTGTCACTCTGATACAAATCTGTGCTTTAATCTTTAA
AAATCCTCAGGACCTTTTCAGCCATGCATACAAGCAAACCACCAATGCAC
ATGAAATAAACATAAATAAAAAAAAAAGGTCAGAAGAGTGAGTTCCAGGA
CAGCTAGGGTTGCACACACAAACCCTCTCTTAAAACCCCATCACCAAAAT
ATTTTTGAAATAAAAAAATGCCAGAGAGGTGGCTCAGCAGTTAAAAATCT
TATTCATGAATTACAACAGCTTAACTGTCAAGTGTTTGTGAAGTCTTCCT
GGACACTCTTACCCAATTCTAACCTCCTCTGTATCCCTTCCATGGTTTTG
CCATACCTACAGCATTACTTTGTAATTTAATGTTTCAGCTGAGTTCCTTT
TTGCTGCAGGAAAATGGTCTATGTTCACATTTGTAACAGAATGCAAGGTT
TTCTCCTATGGATAATCGCTTTTTTCTTTAATACTATA

Query= MSMg01no166_b06.g1 MSMg01no166_b06.g1 CHROMAT_FILE:
MSMg01no166_b06.g1 PHD_FILE: MSMg01no166_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:28 2005
         (523 letters)



>mm_chr3_125644986_125645909
          Length = 924

 Score =  951 bits (492), Expect = 0.0
 Identities = 518/532 (97%), Gaps = 9/532 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaggaatcagtgggacactatgtgtaataatggatgggcttaattaaggagaaaaacta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 aaaggaatcagtgggacactatgtgtaataatggatgggcttaattaaggagaaaaacta 639

                                                                       
Query: 61  gagcagttgctctagtcaaaagtgtcctctatggttgacctagatgtctcagtagtttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gagcagttgctctagtcaaaagtgtcctctatggttgacctagatgtctcagtagtttaa 579

                                                                       
Query: 121 gagcactggttgctcttccaaagtcctggtttcaattcccagcacccacatggttggtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gagcactggttgctcttccaaagtcctggtttcaattcccagcacccacatggttggtca 519

                                                                       
Query: 181 taacgccctgtcactctgatacaaatctgtgctttaatctttaaaaatcctcaggacctt 240
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 518 taacgccctgtcactctgatccaaatctgtgctttaatctttaaaaatcctcaggacctt 459

                                                                       
Query: 241 ttcagccatgcatacaagcaaaccaccaatgcacatgaaataaacataaat--------- 291
           |||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct: 458 ttcagccatgcatacaagcaaaccaccaatgcacatgaaataaacataaatcaaaaaaaa 399

                                                                       
Query: 292 aaaaaaaaaaggtcagaagagtgagttccaggacagctagggttgcacacacaaaccctc 351
           ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 398 aaaaaaaaaaggtcagaagagtgagttccaggacagctagggttgcacaaagaaaccctc 339

                                                                       
Query: 352 tcttaaaaccccatcaccaaaatatttttgaaataaaaaaatgccagagaggtggctcag 411
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 338 tcttaaaaccccatcaccaaaatatttttgaaataaaaaaatgctggagaggtggctcag 279

                                                                       
Query: 412 cagttaaaaatcttattcatgaattacaacagcttaactgtcaagtgtttgtgaagtctt 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cagttaaaaatcttattcatgaattacaacagcttaactgtcaagtgtttgtgaagtctt 219

                                                               
Query: 472 cctggacactcttacccaattctaacctcctctgtatcccttccatggtttt 523
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cctggacactcttacccaattctaacctcctctgtatcccttccatggtttt 167


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 924
Length adjustment: 10
Effective length of query: 513
Effective length of database: 914
Effective search space:   468882
Effective search space used:   468882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)