Query= MSMg01no166_e12.b1 MSMg01no166_e12.b1 CHROMAT_FILE:
MSMg01no166_e12.b1 PHD_FILE: MSMg01no166_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:44 2005
(269 letters)
>mm_chr3_94522198_94522866
Length = 669
Score = 511 bits (264), Expect = e-149
Identities = 264/264 (100%)
Strand = Plus / Plus
Query: 4 ggaattcttcagaaatgaagtaattgtgattttctccttaccctgctctgggcagcacaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttcagaaatgaagtaattgtgattttctccttaccctgctctgggcagcacaa 263
Query: 64 ctctgaattggattagagactgcaacctgctggcagctttaataaatctggcaaattata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctctgaattggattagagactgcaacctgctggcagctttaataaatctggcaaattata 323
Query: 124 atctgaattgagtctggtgtgattgtttcccggtgatctcaaactccatgacaatctctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atctgaattgagtctggtgtgattgtttcccggtgatctcaaactccatgacaatctctc 383
Query: 184 agtgatggagtgcatttacaaccataggacagcttcaattttcagcaccaaagtgaggat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agtgatggagtgcatttacaaccataggacagcttcaattttcagcaccaaagtgaggat 443
Query: 244 ggtgagaaggaggggggaggagga 267
||||||||||||||||||||||||
Sbjct: 444 ggtgagaaggaggggggaggagga 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no166_e12.g1 MSMg01no166_e12.g1 CHROMAT_FILE:
MSMg01no166_e12.g1 PHD_FILE: MSMg01no166_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:44 2005
(620 letters)
>mm_chr3_94688607_94689626
Length = 1020
Score = 949 bits (491), Expect = 0.0
Identities = 496/499 (99%), Gaps = 3/499 (0%)
Strand = Plus / Minus
Query: 1 aatgtcaaacaaacaaagccagcacctaattcttttgaaacagtgggtagaaaactcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aatgtcaaacaaacaaagccagcacctaattcttttgaaacagtgggtagaaaactcatc 437
Query: 61 cactttggtgcctgtttacatgggttagagtaggttgccttctgttaagccagtctaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cactttggtgcctgtttacatgggttagagtaggttgccttctgttaagccagtctaatt 377
Query: 121 tctccaatgttttgcccgcctgtgtagcctctgcttcgagaagttctagagaagcagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tctccaatgttttgcccgcctgtgtagcctctgcttcgagaagttctagagaagcagcca 317
Query: 181 gtgctgagtcagactgaggctcgggagcttgtggagcgctgcatgagagtgctgtactac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtgctgagtcagactgaggctcgggagcttgtggagcgctgcatgagagtgctgtactac 257
Query: 241 agagatgcccgttcgtataaccgggtgagaaatgggctggaaggtacaaattctggagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agagatgcccgttcgtataaccgggtgagaaatgggctggaaggtacaaattctggagcc 197
Query: 301 aggcatggtggcacatgcctttaatcccagtactcgggaaacaggggtgggtgggactct 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 196 aggcatggtggcacatgcctttaatcccagta---gggaaacaggggtgggtgggactct 140
Query: 361 gcatttgaggcgagcttggtttacatagtgagacgctatcattgcacgctttgccttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gcatttgaggcgagcttggtttacatagtgagacgctatcattgcacgctttgccttctt 80
Query: 421 tcagtttcaaattgccactgtgactgaaaagggtgtcgagatagaaggaccgctgtccgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tcagtttcaaattgccactgtgactgaaaagggtgtcgagatagaaggaccgctgtccgc 20
Query: 481 acagaccaactgggacatc 499
|||||||||||||||||||
Sbjct: 19 acagaccaactgggacatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
