Query= MSMg01no167_f04.b1 MSMg01no167_f04.b1 CHROMAT_FILE:
MSMg01no167_f04.b1 PHD_FILE: MSMg01no167_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:03 2005
(613 letters)
>mm_chr3_92683252_92684262
Length = 1011
Score = 1112 bits (575), Expect = 0.0
Identities = 600/609 (98%), Gaps = 2/609 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccacttttctttacccgttcatcagtgaatgaacatctagactgtttccattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccacttttctttacccgttcatcagtgaatgaacatctagactgtttccattt 264
Query: 65 tctggctaccatgaatagagcagcaataaatcaggatatgtatatagtaggatatatgtt 124
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 tctggctaccatgaatagagcagcaataaatcagaatatgtatatagtaggatatatgtt 324
Query: 125 cctttcaaatgtgcccataagtcatattttcatattgatagtagatctattggcatattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctttcaaatgtgcccataagtcatattttcatattgatagtagatctattggcatattt 384
Query: 185 tttagaaacctccactctgattatgagagatatacaaagacagagagagacaaaatgaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttagaaacctccactctgattatgagagatatacaaagacagagagagacaaaatgaca 444
Query: 245 taatgccccttcttccttgtctttctcttgtatacttctctctgttacctctttttctct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taatgccccttcttccttgtctttctcttgtatacttctctctgttacctctttttctct 504
Query: 305 ttcttattaaataaaaaaaattagatattggtctcatgatgcaggctgttagtgtcaggt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 505 ttcttattaaataaaaaaaattagatattggtctcatgatgcaggctgttagtctcaggt 564
Query: 365 acttgcgagtttgcccaacagcaatggctaaagttcaaagtttgtctgtaaattcaagag 424
||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acttgggagtttgcc--acagcaatggctaaagttcaaagtttgtctgtaaattcaagag 622
Query: 425 cagcctgaatgtcttagtgaggggctggtagaaaagttggctaatgtgtttattgctgcc 484
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 623 cagcctgaatgtcttagtgagggcctggtagaaaatttggctaatgtgtttattgctgcc 682
Query: 485 atgttgttatgcttcttagattttttagttgtttaaatttttatgaaagaaagagtttat 544
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 683 atgttgttatgcttcttagattttttaattgtttaaatttttatgaaagaaagagtttat 742
Query: 545 gactatggtttccaaggggaagtccacaatggtggtggaaaaggccagaacagagagctt 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 743 gactatggtttccaaggggaagtccacaatggtggtggaaaaggccagaacagaaagctt 802
Query: 605 acagatcac 613
|||||||||
Sbjct: 803 acagatcac 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1011
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1001
Effective search space: 603603
Effective search space used: 603603
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_f04.g1 MSMg01no167_f04.g1 CHROMAT_FILE:
MSMg01no167_f04.g1 PHD_FILE: MSMg01no167_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:03 2005
(612 letters)
>mm_chr3_92760028_92761039
Length = 1012
Score = 613 bits (317), Expect = e-179
Identities = 320/321 (99%)
Strand = Plus / Minus
Query: 1 aatgcctcttctgacctcttagacacaaaatacatatgtggcacgtaggtataaatgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgcctcttctgacctcttagacacaaaatacatatgtggcacgtaggtataaatgcag 262
Query: 61 aaacacccaccaaaaaaacaaaattaaaaaatgtgcaaaatagaccatgatcaaaattta 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactcccaccaaaaaaacaaaattaaaaaatgtgcaaaatagaccatgatcaaaattta 202
Query: 121 tttatttatctttatgagatgttttatttatttacatttctaatgttatcccctttcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatttatctttatgagatgttttatttatttacatttctaatgttatcccctttcctg 142
Query: 181 atttccccccacccagaaaccctctattccatcccctctcctcctgctactatgaaggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atttccccccacccagaaaccctctattccatcccctctcctcctgctactatgaaggtg 82
Query: 241 tgcccccacccatccacccacccctgcctccacactctcgcactcacactggggcatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tgcccccacccatccacccacccctgcctccacactctcgcactcacactggggcatcaa 22
Query: 301 gccttcatgggaacaagggcc 321
|||||||||||||||||||||
Sbjct: 21 gccttcatgggaacaagggcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
