Query= MSMg01no168_m08.b1 MSMg01no168_m08.b1 CHROMAT_FILE:
MSMg01no168_m08.b1 PHD_FILE: MSMg01no168_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:14 2005
(413 letters)
>mm_chr3_112272696_112273507
Length = 812
Score = 704 bits (364), Expect = 0.0
Identities = 394/412 (95%), Gaps = 15/412 (3%)
Strand = Plus / Plus
Query: 5 gaattcagtgagagttacattgtttaaattaaaaataatattcaaataacaatgcataag 64
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtgatagttacatt-tttaaattaaaaataatattcaaataacaatgcataag 263
Query: 65 ctctaacaaagcataaatattacttatgtctcaattttaaacattgcttcaaataaacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctctaacaaagcataaatattacttatgtctcaattttaaacattgcttcaaataaacat 323
Query: 125 ttagtttgttataagaaagagttgtatatttttattaaacagtagcaaaaataataaatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttagtttgttataagaaagagttgtatatttttattaaacagtagcaaaaataataaatc 383
Query: 185 cccaccattctaacaaagaactctgatttttataatagccatatttatgtcattcacata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cccaccattctaacaaagaactctgatttttataatagccatatttatgtcattcacata 443
Query: 245 gtaactagtataattcacattgcagaaaaatgagagctaatagtatcttctttgacatat 304
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 gtaactagtataattcacattgcagaaaaatgagagctaatggtatcttctttgacatat 503
Query: 305 attgttacaagcccactgctctatattatctagctttcatgtcatatttttttta----- 359
||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 504 attgttacaagcccactgctctaaattatctagctttcatgtcatat-------aaaaac 556
Query: 360 --gtaatgtataaacatttgtacagagatgattcaattttcctcattttttt 409
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aagtaatgtataaacatttgtacagagatgattcaattttcctcattttttt 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 812
Length adjustment: 9
Effective length of query: 404
Effective length of database: 803
Effective search space: 324412
Effective search space used: 324412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_m08.g1 MSMg01no168_m08.g1 CHROMAT_FILE:
MSMg01no168_m08.g1 PHD_FILE: MSMg01no168_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:14 2005
(325 letters)
>mm_chr3_112406084_112406808
Length = 725
Score = 629 bits (325), Expect = 0.0
Identities = 325/325 (100%)
Strand = Plus / Minus
Query: 1 tcccaggcataatttattcctgctctgcaagctgaaatgcagattctatgaccttctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tcccaggcataatttattcctgctctgcaagctgaaatgcagattctatgaccttctctt 466
Query: 61 tcctctagtgacttggacagttatttagtcacttatggttatttaagtgtcagattatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tcctctagtgacttggacagttatttagtcacttatggttatttaagtgtcagattatat 406
Query: 121 tattctctatatttgtcccataggacatcgagagagataccttagggtcacacatctaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tattctctatatttgtcccataggacatcgagagagataccttagggtcacacatctaac 346
Query: 181 agaatgaaggaaaaattcacaaaattgtgggaaaaatggatagcacaacaaaagaatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agaatgaaggaaaaattcacaaaattgtgggaaaaatggatagcacaacaaaagaatctt 286
Query: 241 atttccactattttaattataaaatcttttcctaatgcaaaaggaaacaaatgctaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atttccactattttaattataaaatcttttcctaatgcaaaaggaaacaaatgctaaatc 226
Query: 301 caggtggctgacaatgaaaatgaac 325
|||||||||||||||||||||||||
Sbjct: 225 caggtggctgacaatgaaaatgaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
