Query= MSMg01no171_h07.b1 MSMg01no171_h07.b1 CHROMAT_FILE:
MSMg01no171_h07.b1 PHD_FILE: MSMg01no171_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:41 2005
(324 letters)
>mm_chr3_150352319_150353043
Length = 725
Score = 540 bits (279), Expect = e-158
Identities = 306/315 (97%), Gaps = 4/315 (1%)
Strand = Plus / Minus
Query: 13 ggaattcacttgtaccac-acagttttggttttgtttgtttgtttggtctgtgttgttgt 71
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ggaattcacttgtaccacaacagttttggttttgtttgtttgtttggtctgtgttgttgt 538
Query: 72 tttgctttgtttttattttgcaaagtaaggctgttcattaggtattggggaatctggaga 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tttgctttgtttttattttgcaaagtaaggctgttcattaggtattggggaatctggaga 478
Query: 132 tggaagctggcctctacagacgagatacaaaaaagcttgtaaccaccaacaatcagaatg 191
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tggaagctggcctctaaagacgagatacaaaaaagcttgtaaccaccaacaatcagaatg 418
Query: 192 ctaaagataaagaggaagaatcttgctagacaaagatcagataggaataccaaagccctc 251
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 417 ctaaagataaagaggaagaatcctgctagacaaagatcagataggaacaccaaagccctc 358
Query: 252 aacactggaccattt-ctctttgttctctaccaggatttctctgctaaattgtaactcta 310
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 357 aacactggaccattttctctttgttctctaccaggagctctctgctaaattgtaactcta 298
Query: 311 ccatacct-tagatt 324
|||||| | ||||||
Sbjct: 297 ccatac-tgtagatt 284
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 725
Length adjustment: 9
Effective length of query: 315
Effective length of database: 716
Effective search space: 225540
Effective search space used: 225540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_h07.g1 MSMg01no171_h07.g1 CHROMAT_FILE:
MSMg01no171_h07.g1 PHD_FILE: MSMg01no171_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:41 2005
(152 letters)
>mm_chr3_150255522_150256073
Length = 552
Score = 271 bits (140), Expect = 2e-77
Identities = 149/152 (98%)
Strand = Plus / Plus
Query: 1 ctttatactgctcatcgatccaaagaagagagaaatcaaaaggcagatataaacaggcat 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 201 ctttatactgctcatcgatccaaagaagagagaaatcaaaaggcacatataaacaagcat 260
Query: 61 cagtttttcatatattctgaacaaaaagcatcactaactagacagtaagaatattctttc 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 cagtttttcatatattctgaacaaaaaacatcactaactagacagtaagaatattctttc 320
Query: 121 ccaatgaattcacttcatgattttcacacatg 152
||||||||||||||||||||||||||||||||
Sbjct: 321 ccaatgaattcacttcatgattttcacacatg 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
