Query= MSMg01no171_p18.b1 MSMg01no171_p18.b1 CHROMAT_FILE:
MSMg01no171_p18.b1 PHD_FILE: MSMg01no171_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:20 2005
(319 letters)
>mm_chr3_96743726_96744442
Length = 717
Score = 596 bits (308), Expect = e-175
Identities = 312/314 (99%), Gaps = 2/314 (0%)
Strand = Plus / Minus
Query: 5 gaattcgttcacatgccctcacatacatgtgaggtacacatgagcgtaggcatgtgcgtg 64
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gaattcgttcacatgcc--cacatacatgtgaggtacacatgagcgtaggcatgtgcgtg 392
Query: 65 atacaatactcacatggaagtcagagaaggccagttcaggcatcagtcctcagcttccac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 atacaatactcacatggaagtcagagaaggccagttcaggcatcagtcctcagcttccac 332
Query: 125 actgtggaagtgctgcctacactgtgttggctccttttcaaacttccaaggattctgttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 actgtggaagtgctgcctacactgtgttggctccttttcaaacttccaaggattctgttc 272
Query: 185 ccacctcccatcttgactccggagcactgtaattacagacttctatgtccaactttacat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccacctcccatcttgactccggagcactgtaattacagacttctatgtccaactttacat 212
Query: 245 ctctacccttacaaagtgagctctttacccactaagccatctccccggcccctaccctca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ctctacccttacaaagtgagctctttacccactaagccatctccccggcccctaccctca 152
Query: 305 ctgtatgctggcta 318
||||||||||||||
Sbjct: 151 ctgtatgctggcta 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 717
Length adjustment: 9
Effective length of query: 310
Effective length of database: 708
Effective search space: 219480
Effective search space used: 219480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_p18.g1 MSMg01no171_p18.g1 CHROMAT_FILE:
MSMg01no171_p18.g1 PHD_FILE: MSMg01no171_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:20 2005
(281 letters)
>mm_chr3_96681787_96682467
Length = 681
Score = 489 bits (253), Expect = e-143
Identities = 274/281 (97%)
Strand = Plus / Plus
Query: 1 aaaccctagaaccatgaaaagctggatacagtggtatccggtggatataaccgtaattcc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 aaaccctagaaccatgaaaagctggatacagtggtatctggtggatataaccgtaattcc 260
Query: 61 aacactcctactgcaagatgggaggcagagggagaattgcttgaaagcccataggccagc 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 aacactcctactgcaagatgggaggcagagggagaatcgcttgaaagcccataggccagc 320
Query: 121 aagcctgggtatgcacatcagcagagacaagagactgtcaatacaagggaacagactcac 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcctgggtatgtacatcagcagagacaagagactgtcaatacaagggaacagactcac 380
Query: 181 gaaagtcctctgcactgtgcaaaggcatcagtaagaaactcagagcctcaacccagagag 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 gaaagtcctctgcactgtgcaaaggcatcagtaagaaactcagagtctcaacccagagag 440
Query: 241 agcctgagcttgaactctccacttctcccacctctctgtag 281
|||||||||||||||||||||||||| || ||||||||||
Sbjct: 441 agcctgagcttgaactctccacttcttccgtctctctgtag 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
