Query= MSMg01no172_p08.b1 MSMg01no172_p08.b1 CHROMAT_FILE:
MSMg01no172_p08.b1 PHD_FILE: MSMg01no172_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:32 2005
(239 letters)
>mm_chr3_36940319_36940957
Length = 639
Score = 458 bits (237), Expect = e-133
Identities = 237/237 (100%)
Strand = Plus / Minus
Query: 1 actagtatcaaactgttgtgtgaaaaactcttggagcttcattcctatttttatcaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 actagtatcaaactgttgtgtgaaaaactcttggagcttcattcctatttttatcaagtc 378
Query: 61 tggtgtagttgatcttgatatcattacttgaaaaatatcccatttcaaatctccatgcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tggtgtagttgatcttgatatcattacttgaaaaatatcccatttcaaatctccatgcac 318
Query: 121 aaaaatctcactaaagcatgaaatacaatttatataataaatttcagagatgatataaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaaaatctcactaaagcatgaaatacaatttatataataaatttcagagatgatataaat 258
Query: 181 aaagcaaaagtaattatcctcccctgcccagcctttttcatttgtattagttgtata 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaagcaaaagtaattatcctcccctgcccagcctttttcatttgtattagttgtata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no172_p08.g1 MSMg01no172_p08.g1 CHROMAT_FILE:
MSMg01no172_p08.g1 PHD_FILE: MSMg01no172_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:32 2005
(653 letters)
>mm_chr3_36772434_36773486
Length = 1053
Score = 1216 bits (629), Expect = 0.0
Identities = 647/659 (98%), Gaps = 11/659 (1%)
Strand = Plus / Plus
Query: 1 cagggcttgaagagatgatagatgaatagaatatcccgagagtaatccaggtgaaatagt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 200 cagggcttgaagagatgatagatgaatagaatatcccgagagtaatcaaggtgaaatagt 259
Query: 61 aagacagtatgaagagaacacacaggatttgtggagtaccattggatggatcaacttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aagacagtatgaagagaacacacaggatttgtggagtaccattggatggatcaacttgga 319
Query: 121 atccgtgggcagagaagagggggtaaacggtatgcagagcagaggaagagtggtgcaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atccgtgggcagagaagagggggtaaacggtatgcagagcagaggaagagtggtgcaggc 379
Query: 181 tgtgacacacataacggcagatacctgtcagaagaactccttccttattttagttttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtgacacacataacggcagatacctgtcagaagaactccttccttattttagttttttt 439
Query: 241 aac------ttttttgaaggcagaggcatggagcaatgcctacaagttcttgaaacgttc 294
||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaccaaaaat-----gaaggcagaggcatggagcaatgcctacaagttcttgaaacgttc 494
Query: 295 cactttaatctgatcagaacctacatttaaaattttttaattataattttttgtttggca 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cactttaatctgatcagaacctacatttaaaattttttaattataattttttgtttggca 554
Query: 355 ggtaactaggaaaataaaatttatgtaggaaagaagcaatccatgatttttaagattgca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ggtaactaggaaaataaaatttatgtaggaaagaagcaatccatgatttttaagattgca 614
Query: 415 agtattgtcagagtacagattactatatgatagtacattttgtttttactgacttgtttt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agtattgtcagagtacagattactatatgatagtacattttgtttttactgacttgtttt 674
Query: 475 tcctctcaacagctaccattttgtcttgtggatggattatttatcttacatactacaatt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tcctctcaacagctaccattttgtcttgtggatggattatttatcttacatactacaatt 734
Query: 535 ctcggaatgttggtcttattttaacactggttcttaacagattgtataaacatggctata 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ctcggaatgttggtcttattttaacactggttcttaacagattgtataaacatggctata 794
Query: 595 tccatattggtaagtgtgtataacactatttcttccatgtaattataagataatatatt 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tccatattggtaagtgtgtataacactatttcttccatgtaattataagataatatatt 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
