TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTTCTTTATGTCCTCTACCATCATCATGAGATATGCTTTTAAATC
CAGGTCTACCTTTTCAGGTGTGTTAGGGTGTCTTGGACTGGGCGAAGTGG
GCGTTCTGGGTTCTGATGCTGGTGAGTGGTCCTGGTTTCTGTTAGTAGGA
TTCTTACGTTTACCTTTCGCCATCTGGCAATCTCAGGAGTTAGTTGTTAT
AGTTGTCTTTGTTAAGAGATTGTTCCTCTGTTGATTTTGTTACCCTCAAT
CAGCAGGCGTGGGAGACAAGTTCTCTCCTCTGAGTTTCAGTGGTCAGAGC
AGNCTCTGTTTTTTAGCTCTCCTCCTCCGCGGAAGGTGTACAGTTATCTG
GTGTTTGGACCCCCCCCTGGCTGAAAATGAAGGCCCAAAGCAGGATTTTC
CCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGGCCGGTTGTCTGGTGTCG
AAGATGGCGTCGCCTCAGAAGCTTTGTGGTTCTCGACAGGAAGGTGGCTG
GACGTCTGGAGCCGAAGATGGCGCCACCTCACAATCTCTGTGGTTCTATG
TCTTCACGGTGCTCGGTCGTCTTGAGCCCGATTATTGCGCCGCTTTTATC
TTTCCTTTATATTCTCCCCCGTTACTTTTTTTGTGCGGGCCTTTGCATTA
CCAAAAGGATAGTTTCTGCTGTTCTTGTCCCCCTTTCTTGTCTTACGA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAGTGTGTTTAAGATTGCTAAACTTC
ATGGACTACTTTGTTGTATGTGTATCTTATTCAAAGTATATTTATTTAAG
TGTAGTGAACATATGTTTATATATAATAAAAATATGATATAAAATATCTT
ATGGTAATTTTGTTTATAACATTATTGCAGCTATTTAGATAAGGATAATT
ACATGTAAGGTTTAAATTAGATTGTTTACATAATATACTACACTTACTGA
AGTATTTTATTTTAATTTCCCCAAGGGCAATACCACATAATCTTATGCAC
ATAAGTTTTTATTTGCCTCTATGTAGAATGTAGCTAATTTGTTTTTTCCT
TTAGAAAGTAGAAGTTTAAAATCAATCAAATAGTATAGGGAGGATGTCTT
TTATAAGTAAAGGTATAATTTTAAAATTAACTTGCAATGAACTAAAGATC
TATTATTAATCCTTCCAAATCTATTTCTTCCCTATTTAGAGATATTAATA
TTTATCATCAATATTCCTTTTTATAGGGATTATTTAACATATATAAAAGT
GTACTTTTAAGCAGTATGTGTTGTACCCTGTAGCATCTATTTGATGCATT
TACTTATTTTCATGTTCATATTTGCAATGAACCCAGGGAAACGCTTCTGC
CCAGTTGGATCCGTTGTTTAACCAAAGAAAACTGTTCTCTAA

Query= MSMg01no177_l08.g1 MSMg01no177_l08.g1 CHROMAT_FILE:
MSMg01no177_l08.g1 PHD_FILE: MSMg01no177_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:20 2005
         (549 letters)



>mm_chr3_77942047_77942995
          Length = 949

 Score =  942 bits (487), Expect = 0.0
 Identities = 528/547 (96%), Gaps = 11/547 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagtgtgtttaagattgctaaacttcatggactactttgttgtatgtgtatcttattcaa 60
           ||||||||||||||||| |||||||||||||||||||         ||||||||| ||||
Sbjct: 860 cagtgtgtttaagattggtaaacttcatggactactt---------tgtatcttactcaa 810

                                                                       
Query: 61  agtatatttatttaagtgtagtgaacatatgtttatatataataaaaatatgatataaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 agtatatttatttaagtgtagtgaacatatgtttatatataataaaaatatgatataaaa 750

                                                                       
Query: 121 tatcttatggtaattttgtttataacattattgcagctatttagataaggataattacat 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tctcttatggtaattttgtttataacattattgcagctatttagataaggataattacat 690

                                                                       
Query: 181 gtaaggtttaaattagattgtttacataatatactacacttactgaagtattttatttta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gtaaggtttaaattagattgtttacataatatactacacttactgaagtattttatttta 630

                                                                       
Query: 241 atttccccaagggcaataccacataatcttatgcacataagtttttatttgcctctatgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 atttccccaagggcaataccacataatcttatgcacataagtttttatttgcctctatgt 570

                                                                       
Query: 301 agaatgtagctaatttgttttttcctttagaaagtagaagtttaaaatcaatcaaatagt 360
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 569 agaatgtagctaatttgttttt-cctttagaaagtagaagtttaaaatcaatcaaatagt 511

                                                                       
Query: 361 atagggaggatgtcttttataagtaaaggtataattttaaaattaacttgcaatgaacta 420
           |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 510 atagggaggatgtcttttataaataaaggtataattttaaagttaacttgcaatgaacta 451

                                                                       
Query: 421 aagatctattattaatccttccaaa-tctatttcttccctatttagagatattaatattt 479
           |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 450 aagatctattattaatacttccaaaatctatttcttccctatttagagatattaatattt 391

                                                                       
Query: 480 atcatcaatattcctttttatagggattatttaacatatataaaagtgtacttttaagca 539
           ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 390 atcataaatattcctttttatagggattattgaacatatataaaagtgtacttttaagca 331

                  
Query: 540 gtatgtg 546
           |||||||
Sbjct: 330 gtatgtg 324


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space:   506121
Effective search space used:   506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)