GGGGGGACCGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCGCGGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGG
GTTATTTGATTTTCTGAAGACCACCTTCTTGAGTTCTTTATATATGTTGG
ATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCT
GTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTCTGCCTTGCAGAAACT
TTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGAGCAAG
CCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTACTCATATCTTCAAGG
CTTTTCCCCACTTTCTCCTCTAAAGTCCCTCCGNCCCTGGCCCCATGTGA
AGTTCCTTGAACCACTTAGATTTGACCCCCACTATAAAAAAATAAGAATG
GATGGAGGGGGATTCTTCTACATGATAACAACCAGTTGTGCCTGCACCAA
TTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTTCCTTGTC
GAACATCTAGTGACCCTTTATTTGATTTCTCTTTTTTTTTGTATCTTCCA
TCCCACTCATTGGCTTTTATTTGCTTTTGTCTCTTTTACCAATTTCTCTG
TTCTTATTTTTCTTTACTATCCTTCTCTCTCAGTTCCTTTTGTGCTCCTC
TTCTCCCTATTCCCATTCTCTTTTTCTTTTTCCCTCTACCTATTTTCTTA
TTTCCTTTTTTCTCCAAGTTAACTGTTTCTATTACTTTATTTGTTTCC

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACAGTCCACTTTGGTAAGACACGT
TTTTAATTTTAATCGTTTCTATGAATCTTCCTCGTGTTTCAGTATTTCTA
TTCTCCCCTCTCCCATGGCAGCTCCCTCTCTTCCTCTGCACCCTGTTTCT
TTTCCTCCTTTTCCTTGGCCTCAGTCCCTCTCTCCCTCTCTCCTTGTTTT
TCATTCTGTCTTTCCCTCACAGAGCCACGTACACTGAGATGTGAATGAAT
TAAATATACTTTCTATAAATGAAGAAGTGGAAGTAAAAGCCCAGAGTAAA
ACCATCTCCCTTCTTTAGGAGGCCTTTGAATGAGCAACTTCCAGCCCAGG
CTCCTGCCTGTAAGGATAAGGACCGGATCGAGCATCCTCATTTAGAGCCT
TTCACATAACCCAGGCTATCACCATTTCTAACGGAATGAGAGACATGGCA
CTCTGAAAAGAGCTTAATGTTTCTTTGAATAAGATGATTAAAAAGAAGAT
TCACATCAATGACTTAATCTGGGCCACTGTTGATGAAGTTCAGAAAGGAG
GGTTTGTTCCAGAGGCCTGTGGAGAGAACGGGAAGAGGACAGAATATACA
GCTTATTGATGCAGCATTAGAGGACGCTTCCACAGTCACTGGCATCAGCT
GCTGAGACATTGGTTGTGTGAAACAAGTTTAGGTTTGG

Query= MSMg01no185_l18.g1 MSMg01no185_l18.g1 CHROMAT_FILE:
MSMg01no185_l18.g1 PHD_FILE: MSMg01no185_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:31 2005
         (541 letters)



>mm_chr3_82464378_82465317
          Length = 940

 Score =  946 bits (489), Expect = 0.0
 Identities = 528/541 (97%), Gaps = 2/541 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagtccactttggtaagacacgtttttaattttaatcgtttctatgaatcttcctcgtg 60
           ||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||
Sbjct: 931 acagtccactttggtaagacacgtttttaattttaattgtttctataaat-ttcctcgtg 873

                                                                       
Query: 61  tttcagtatttctattctcccctctcccatggcagctccctctcttcctctgcaccctgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 tttcagtatttctattctcccctctcccatggcagctccctctcttcctctgcaccctgt 813

                                                                       
Query: 121 ttcttttcctccttttccttggcctcagtccctctctccctctctccttgtttttcattc 180
           ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ttcttttactcctcttccttgccctcagtccctctctccctctctccttgtttttcattc 753

                                                                       
Query: 181 tgtctttccctcacagagccacgtacactgagatgtgaatgaattaaatatactttctat 240
           |||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 752 tgtcttcccctcacagagccacatacactgagatgtgaatgagttaaatatactttctat 693

                                                                       
Query: 241 aaatgaagaagtggaagtaaaagcccagagtaaaaccatctcccttctttaggaggcctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 aaatgaagaagtggaagtaaaagcccagagtaaaaccatctcccttctttaggaggcctt 633

                                                                       
Query: 301 tgaatgagcaacttccagcccaggctcctgcctgtaaggataaggaccggatcgagcatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgaatgagcaacttccagcccaggctcctgcctgtaaggataaggaccggatcgagcatc 573

                                                                       
Query: 361 ctcatttagagcctttcacataacccaggctatcaccatttctaacggaatgagagacat 420
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 572 ctcatttagagcctttcacataacccaggctatcaccatttctaacagaatgagagacat 513

                                                                       
Query: 421 ggcactctgaaaagagcttaatgtttctttgaataagatgattaaaaagaagattcacat 480
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ggca-tctgaaaagagcttaatgtttctttgaataagatgattaaaaagaagattcacat 454

                                                                       
Query: 481 caatgacttaatctgggccactgttgatgaagttcagaaaggagggtttgttccagaggc 540
           |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 453 caatgatttaatctgggccactgttgatgaagttcagaaaggaggatttgttccagaggc 394

            
Query: 541 c 541
           |
Sbjct: 393 c 393


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 940
Length adjustment: 10
Effective length of query: 531
Effective length of database: 930
Effective search space:   493830
Effective search space used:   493830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)