Query= MSMg01no186_n12.b1 MSMg01no186_n12.b1 CHROMAT_FILE:
MSMg01no186_n12.b1 PHD_FILE: MSMg01no186_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:58 2005
(255 letters)
>mm_chr3_31971359_31972013
Length = 655
Score = 426 bits (220), Expect = e-124
Identities = 252/280 (90%), Gaps = 28/280 (10%)
Strand = Plus / Minus
Query: 4 ggaattcttttatgtagcattttagaaaaggcatgagtagagggcagggttattcaaggc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ggaattcttttatgtagcattttagaaaaggcatgagtagagggcagggttattcaaggc 285
Query: 64 tccaggtaggggatgattctataacaaagatagaaattagtagatttgacggagtaccgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tccaggtaggggatgattctataacaaagatagaaattagtagatttgacggagtaccgt 225
Query: 124 aattcggctatactggtatat----------gcacacacacacacacacacacacacaca 173
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 224 aattcggctatactggtatatacacacacatgcacacacacacacacacacacacacaca 165
Query: 174 cacac------------------gaatgcacatatatgtggcataatatgaatgtgaggt 215
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 164 cacacacacacacacacacacacgaatgcacatatatgtggcataatatgaatgtgaggt 105
Query: 216 cagagagcagcatttggggattgctactttcttttcacca 255
||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 cagagagcagcatttggggattgctactttcttttcacca 65
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 655
Length adjustment: 9
Effective length of query: 246
Effective length of database: 646
Effective search space: 158916
Effective search space used: 158916
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no186_n12.g1 MSMg01no186_n12.g1 CHROMAT_FILE:
MSMg01no186_n12.g1 PHD_FILE: MSMg01no186_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:58 2005
(285 letters)
>mm_chr3_31934509_31935193
Length = 685
Score = 526 bits (272), Expect = e-154
Identities = 278/280 (99%)
Strand = Plus / Plus
Query: 1 agttcaaaaggatgggttgccagatttccaactgggctcgatttctgtatgtgtcaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttcaaaaggatgggttgccagatttccaactgggctcgatttctgtatgtgtcaggac 260
Query: 61 ttctgacacacctgcttggagtgggctcaggacaaagccaagcaaggacaggcatggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctgacacacctgcttggagtgggctcaggacaaagccaagcaaggacaggcatggaca 320
Query: 121 aggaaagggggtaagtcatctctgggcatagttccattatttaacattcacgaaagtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaaagggggtaagtcatctctgggcatagttccattatttaacattcacgaaagtttg 380
Query: 181 ctttgacaaatacatggaatctctgatcagtgttcacgcgttttcctggaaaagcatatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttgacaaatacatggaatctctgatcagtgttcacgcgttttcctggaaaagcatatc 440
Query: 241 taagagagaaactctgctgtggtctgctgactgcttctga 280
||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 441 taagagagaaattctgctgtgttctgctgactgcttctga 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
