Query= MSMg01no188_p23.b1 MSMg01no188_p23.b1 CHROMAT_FILE:
MSMg01no188_p23.b1 PHD_FILE: MSMg01no188_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:50 2005
(237 letters)
>mm_chr3_84434431_84435067
Length = 637
Score = 406 bits (210), Expect = e-118
Identities = 225/230 (97%)
Strand = Plus / Plus
Query: 5 gaattctctagctaatgactgtgagtgatgtctgcgcgataaagattagaaagattagaa 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattctctagctaatgactgtgagtgatgtctgcgtgataaagattagaaagattagaa 264
Query: 65 agctggaagtggaatccgtgccggcactcctcatttcctacactgaaggccctgtctctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agctggaagtggaatccgtgccggcactcctcatttcctacactgaaggccctgtctctg 324
Query: 125 aggaggaagagacagagcacagcaaacctgaaattcacagtgggttccacctcaggggaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggaggaagagacagagcacagcaaacctgaaattcacagtgggttccacctcaggggaa 384
Query: 185 ccgataaattaactgcctgcctctgtcttactgggggtggggggagggtg 234
||||||| ||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 385 ccgataagttagctgcctgcctccatcttactgggggtggggggagggtg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no188_p23.g1 MSMg01no188_p23.g1 CHROMAT_FILE:
MSMg01no188_p23.g1 PHD_FILE: MSMg01no188_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:50 2005
(289 letters)
>mm_chr3_84533749_84534433
Length = 685
Score = 516 bits (267), Expect = e-151
Identities = 282/289 (97%), Gaps = 4/289 (1%)
Strand = Plus / Minus
Query: 1 gggtggaagaattctgggagcaaggaggattccacaggaagactaagcaagcagtacagg 60
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 485 gggtggaagaattctgggagcgaggaggattccacaggaaggctaagcaagcagtacagg 426
Query: 61 tagaaacacaaagcgctcctttgggaagaccggaagtcagccatctccccaacccccact 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tagaaacacaaagcgttcctttgggaagaccggaagtcagccatctccccaacccccact 366
Query: 121 cccaccccaccccacccccgagtttttggcgtcacactgattctttggaggctcacagtg 180
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cccaccccac----cccccgagtttttggcgtcacactgattctttggaggctcacagtg 310
Query: 181 tgctaagcaagggttgctgaaggtacccatgggtcagtcaaagcatgctccagagtctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgctaagcaagggttgctgaaggtacccatgggtcagtcaaagcatgctccagagtctat 250
Query: 241 tccacaggcagttcctgcgcaggtagcaaaaaaggctgtgaaggtcaag 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tccacaggcagttcctgcgcaggtagcaaaaaaggctgtgaaggtcaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 685
Length adjustment: 9
Effective length of query: 280
Effective length of database: 676
Effective search space: 189280
Effective search space used: 189280
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
