TCTTTTCTCTCCTCTTNCTCCTCCCTTCACTCCACCTCCTTTCTTCTTNC
CATTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTAAATATCGGGTTGGTCTGTGAAGATATAAAATTAGCT
TCAGAACTGATCTGACCTTTTATGTCCCCTGTGGTTTATGTCATTTAGGG
CATCTATGTTTACAGTTGCTATACTTTATAAGTTAATTGTTCCCTTCATT
AATAGAGTGTTTTCTGGTGGCCAAGATGTTTTAATAGTATATCTATGCTA
TAGATAGAAGTATATGGTGCTATAAATTTAGTAAGAATAGTCACTGGGTT
ACATAGTTACTGTGGGTGAATTTTATGGTATGTAAATTGCATCTTACTAA
CACGGCCTTTGAAAATATTTTTTGGCCCCCTGCCCTATACTTCTTACTAC
ATTAAAGTTAACAAAATTCTTACACCTGATAATATTTGCTGAACTTTAGT
ATCCGTCTCTGTCAGAGTCTTCTGAAAATGTTTTATTTAATTATCATTAT
ATCCCTTAGAGGTAGGAATTACTTTCCACCTTAGATGTGTATAAATGGTC
ACAGAAAAAAAAATAAGCCGAAATTCGGTCACTCTGTGAATATTATATAG
AGGATGAATGTGAGCCCCTTGTCTGGTGGAGAGGCTTGCGATCTTAATGA
AGCATAGCACCTCTTTGTTAACTATTTAAGTAATTCATTCTGACTTTGCT
TCCTGTATGAAATATACGACCTATCTTCC

GGTTTCNCCCTCTCTATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATACACATACA
TAAAATAGAAGTTATTTTTATTAATTGTGAAGTATTACTTATAACTAGTC
ATAAGAGCTTTTTTGAAATGGTAAGTTGGAATTTTACTGTGTGCATATAA
CATAATAGTCATGTAGGTATTTTATTAACGCTCACTTTAAAATTTTACTA
TAATGAAAGCTGCACACTAAGAACAGTTGTGTGCCTTACTAGAAGAGTGT
TTTCATATTTATAATGTATTTTATAAAACCTGAAAAGAAAACACACACAT
TTAAGTGACAAGCTGAATGCATTATGTGTTCCTAGCAAGCCAAGCTGTCT
GAAACAGTTTCAGCTTCCAGTGACTGGAAAAGTCAGTACGAGAAAATTGC
CATAGAAAAAACTGAGCTGGAAGTGCAGATCGAAACAATGAAAAAGTAAG
CAGGAGTTCACACTGATTGCTCTTCAGTGCTGCATGGTTGGTTTTTCTGG
GTATTGTGTAGTGAAAATGCTTTCAATGCTAGGTTTTCTGCCTCTAATAT
AAACAGTGCACTGAAGCTCCCATTTCCTCTAATATAAACAGTGCACTGAT
GCTCCCATTTCCTCTAATATAAACAGTGCACTGAAGCTCCCATTTCCAAA
GGTGAGACTTGCACGGCAGTACTTTGTGCTTGAGGATG

Query= MSMg01no189_f06.g1 MSMg01no189_f06.g1 CHROMAT_FILE:
MSMg01no189_f06.g1 PHD_FILE: MSMg01no189_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:17 2005
         (647 letters)



>mm_chr3_144798090_144799139
          Length = 1050

 Score = 1013 bits (524), Expect = 0.0
 Identities = 601/650 (92%), Gaps = 38/650 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   atacacatacataaaatagaagttatttttattaattgtgaagtattacttataactagt 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 atacacatacataaaatagaagttatttctattaattgtgaagtattacttataactagt 260

                                                                       
Query: 61  cataagagcttttttgaaatggtaagttggaattttactgtgtgcatataacataatagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cataagagcttttttgaaatggtaagttggaattttactgtgtgcatataacataatagt 320

                                                                       
Query: 121 catgtaggtattttattaacgctcactttaaaattttactataatgaaagctgcacacta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgtaggtattttattaacgctcactttaaaattttactataatgaaagctgcacacta 380

                                                                       
Query: 181 agaacagttgtgtgccttactagaagagtgttttcatatttataatgtattt---tataa 237
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||
Sbjct: 381 agaacagttgtgtgctttactagaagagtgttttcatatttataatgtatttgtatataa 440

                                                                       
Query: 238 aacctgaaaagaaaacacacacatttaagtgacaagctgaatgcattatgtgttcctagc 297
           |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| 
Sbjct: 441 aacctgaaaagaaaacacacacttttaagcgacaagctgaatgcattatgtgttcctagg 500

                                                                       
Query: 298 aagccaagctgtctgaaacagtttcagcttccagtgactggaaaagtcagtacgagaaaa 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 aagccaagctgtctgaaacagtttcagcttccagtgactggaaaagtcagttcgagaaaa 560

                                                                       
Query: 358 ttgccatagaaaaaactgagctggaagtgcagatcgaaacaatgaaaaagtaagcaggag 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgccatagaaaaaactgagctggaagtgcagatcgaaacaatgaaaaagtaagcaggag 620

                                                                       
Query: 418 ttcacactgattgctcttcagtgctgcatggttggtttttctgggtattgtgtagtgaaa 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 621 ttcacactgattgctcttcagtgctgcatggttggtttttctgggtattgtgtagcgaag 680

                                                                       
Query: 478 atgctttcaatgctaggttttctgcctctaatataaacagtgcactgaagctcccatttc 537
           ||||||||||||||||||||||||||||||                              
Sbjct: 681 atgctttcaatgctaggttttctgcctcta------------------------------ 710

                                                                       
Query: 538 ctctaatataaacagtgcactgatgctcccatttcctctaatataaacagtgcactgaag 597
             |||   |||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 711 --cta---taaacagtgcactgatgctcccatttcctctactataaacagtgcgctgaag 765

                                                             
Query: 598 ctcccatttccaaaggtgagacttgcacggcagtactttgtgcttgagga 647
           |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ctcccattcccaaaggtgagacttgcacggcagtactttgtgcttgagga 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1050
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1040
Effective search space:   662480
Effective search space used:   662480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)