Query= MSMg01no189_g10.b1 MSMg01no189_g10.b1 CHROMAT_FILE:
MSMg01no189_g10.b1 PHD_FILE: MSMg01no189_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:23 2005
(326 letters)
>mm_chr3_96807736_96808461
Length = 726
Score = 557 bits (288), Expect = e-163
Identities = 312/322 (96%), Gaps = 6/322 (1%)
Strand = Plus / Minus
Query: 5 gaattccatccccaggaacccacatggtggaaggattgaacatccacaactcctgcaagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gaattccatccccaggaacccacatggtggaaggattgaacatccacaactcctgcaagt 568
Query: 65 tgtcctctgacccccacccacatgttgtaggtggcaagtg--cacacacacacctaatta 122
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 567 tgtcctctgacccccacccacatgttgtaggtggcaagtgcacacacacac--ctaatta 510
Query: 123 attagctaattaattaaatgtaaaactaactaaagaaaaaaggcaaccagcccagaagct 182
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 509 attagctaattaattaaatgtaaaactaaccaaagaaaaaaggcaaccagcccagaagtt 450
Query: 183 tctgcttcttgacctcaccaggtgctgaaggcagactgaggctggggtgtcaaggtttct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tctgcttcttgacctcaccaggtgctgaaggcagactgaggctggggtgtcaaggtttct 390
Query: 243 acttcctgacaccctcacctcttagcacccccatgcaggctgtctggtacctttagaaca 302
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 389 acttcctgacaccctcacctcgtagcacgcccatgcaggctgtctggtacctttagaaca 330
Query: 303 caatctggccacct--attttt 322
|||||||||||||| ||||||
Sbjct: 329 caatctggccaccttcattttt 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_g10.g1 MSMg01no189_g10.g1 CHROMAT_FILE:
MSMg01no189_g10.g1 PHD_FILE: MSMg01no189_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:23 2005
(284 letters)
>mm_chr3_96706735_96707418
Length = 684
Score = 507 bits (262), Expect = e-148
Identities = 277/282 (98%), Gaps = 4/282 (1%)
Strand = Plus / Plus
Query: 1 cataaaaagacactgtggaaatctggaggcacgatggcacagccaggttaagaaactaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataaaaagacactgtggaaatctggaggcacgatggcacagccaggttaagaaactaaa 260
Query: 61 agaagtttaggaagtctatacagtataaaaaacaaaatgagaacatggtgagtgagacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaagtttaggaagtctatacagtataaaaaacaaaatgagaacatggtgagtgagacac 320
Query: 121 aaggctaaatagccaaaagtcagggtcctatcgtaagccgctatgtatgacatgttaagg 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 aaggctaaatagccaaaagtcagggtcctatcgtaagccgctatatatgacatgttaagg 380
Query: 181 actttgtgctttattctgtggcatgaacaaaaatgtcagaggtaataagttttataaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actttgtgctttattctgtggcatgaacaaaaatgtcagaggtaataagttttataaagt 440
Query: 241 tta-tcttcttttattatttgtgtg-tgtgcacatgcgcttg 280
||| | ||||||||||||||||||| | ||||||||||||||
Sbjct: 441 ttaat-ttcttttattatttgtgtgct-tgcacatgcgcttg 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
