Query= MSMg01no192_a03.b1 MSMg01no192_a03.b1 CHROMAT_FILE:
MSMg01no192_a03.b1 PHD_FILE: MSMg01no192_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:49 2005
(424 letters)
>mm_chr3_6797127_6797950
Length = 824
Score = 775 bits (401), Expect = 0.0
Identities = 404/405 (99%)
Strand = Plus / Minus
Query: 16 gaattcatatatgagtcagatatgttttgaaaaacctcattaaatggaatcattaagttt 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaattcatatatgagtcagatatgttttgaaaaacctcattaaatggaatcattaagttt 561
Query: 76 acatctacaaaatgttaatctctaagttcaatagcccacaatatgcaatagtccacaatt 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acatctacaaaatgttaatctctaagttcaatagcccacaatatgcaatagtccacaatt 501
Query: 136 tggagttttggccttcttcatatcaatgtccaccctatggcccttcaggttactttattc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tggagttttggccttcttcatatcaatgtccaccctatggcccttcaggttactttattc 441
Query: 196 catacaggacatttggcattttccataatgcccaaagactaatttcccagtgttatctat 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catacaggacatttggcattttccataatgcccaaagactaatttcccagtgttatctat 381
Query: 256 cttctcatttactaagatatataaaacatatgattgattccttttaaatatattgttctt 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 380 cttctcatttactaagatatataaaacatatgattgattccttttaaatatattgttttt 321
Query: 316 aaacacttgtacagtttttagcctgattttaccacatggtgacacattaagagtaggatt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaacacttgtacagtttttagcctgattttaccacatggtgacacattaagagtaggatt 261
Query: 376 tgtatgatgggaaatttacattttgcgaatagtccacagaatata 420
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtatgatgggaaatttacattttgcgaatagtccacagaatata 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_a03.g1 MSMg01no192_a03.g1 CHROMAT_FILE:
MSMg01no192_a03.g1 PHD_FILE: MSMg01no192_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:49 2005
(387 letters)
>mm_chr3_6783043_6783829
Length = 787
Score = 710 bits (367), Expect = 0.0
Identities = 382/387 (98%)
Strand = Plus / Plus
Query: 1 atttagcgttgccatatgaatatgatgtcaaaaattaccagttgacattagataaactat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttagcgttgccatatgaatatgatgtcaaaaattaccagttgacattagataaactat 260
Query: 61 taagaggaccatttatagagaacaataaatgcccatgtttggatgaaatgagataataat 120
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 tgagaggaccatttatagagaacaatcaatgcccatgtttggatgaaatgagataataat 320
Query: 121 aagatttaaaatgtcaaagaatgaggctgggcagtcagtagagtacaaagcccatgttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagatttaaaatgtcaaagaatgaggctgggcagtcagtagagtacaaagcccatgttaa 380
Query: 181 atcgccagcctatggtgttacattcttgagtttgttaggcaagaagaaaaagcgttaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 381 atcgccagcctatggtgttacattcttgagtttgttaggcaagaagaaaaaaccttaggg 440
Query: 241 ccatctttcactatgtaagtgttaggaagtcagtgttaaaaagtcagcttaggaagcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatctttcactatgtaagtgttaggaagtcagtgttaaaaagtcagcttaggaagcagg 500
Query: 301 agccactatttaaaaaagagaaaagagaatcatgaaatgtcaatacaacagtttgctata 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 agccactatttaaaaaagagaaaagagaatcaagaaatgtcaatacaacagtttgctata 560
Query: 361 cagttccccatagacgcatttaaagaa 387
|||||||||||||||||||||||||||
Sbjct: 561 cagttccccatagacgcatttaaagaa 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
