Query= MSMg01no194_f08.b1 MSMg01no194_f08.b1 CHROMAT_FILE:
MSMg01no194_f08.b1 PHD_FILE: MSMg01no194_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:10 2005
(239 letters)
>mm_chr3_152867939_152868577
Length = 639
Score = 445 bits (230), Expect = e-129
Identities = 236/238 (99%)
Strand = Plus / Plus
Query: 1 tcaaccgtaggtaagttttaaagtgcaattcatagggccgaaccaccagaaagatcagaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tcaaccgtaggtaagttttaaagtgcaattgatagggccgaaccaccagaaagatcagaa 260
Query: 61 tgaacatgaccgcctcccatggaacgccaagttcaaattactaacagagtcagtatccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaacatgaccgcctcccatggaacgccaagttcaaattactaacagagtcagtatccac 320
Query: 121 accagagaatgtccagggccatggtcacaccctgaacatcctgcccacaccgtcagcacc 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 accagagaatgtccagggccatggtcacaccctgaacatcctgcctacaccgtcagcacc 380
Query: 181 atcagcctctcttcaccacagctgcagtgtcatggtcgggaagcacggcatcaggaca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcagcctctcttcaccacagctgcagtgtcatggtcgggaagcacggcatcaggaca 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no194_f08.g1 MSMg01no194_f08.g1 CHROMAT_FILE:
MSMg01no194_f08.g1 PHD_FILE: MSMg01no194_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:10 2005
(160 letters)
>mm_chr3_152924393_152924951
Length = 559
Score = 286 bits (148), Expect = 4e-82
Identities = 157/160 (98%), Gaps = 1/160 (0%)
Strand = Plus / Minus
Query: 1 tctgctcctccccaggagatggtcagatgaggtgaggatgggggagggagggctgtagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tctgctcctccccaggagatggtcagatgaggtgaggatgggggagggagggctgtagct 300
Query: 61 gtttgacagtgggtctttcagaccatggtggggttttacttaaacagtggaaggccaggg 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 299 gtttgacagtgggtctttcagaccatggtggggttttacttagacagtggaaggccaggg 240
Query: 121 aaggatatttaatggtgcccagagtcaccctgaagaatgc 160
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 239 aaggg-atttaatggtgcccagagtcaccctgaagaatgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 559
Length adjustment: 8
Effective length of query: 152
Effective length of database: 551
Effective search space: 83752
Effective search space used: 83752
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
