MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-201I12
Chromosome	3 (Build37)
Map Location	20,359,088 - 20,359,644
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Dnajc5b, EG620290, Trim55, Crh, LOC665002, LOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3, Hltf, Gyg, Cpa3, EG664965, LOC100040283, Cpb1, Agtr1b
Downstream gene	EG665094
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dnajc5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66326 MGI:1913576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG620290 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620290 MGI:3646012
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins

name	Trim55 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381485 MGI:3036269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12918 MGI:88496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665002 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665002
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039304 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039304
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040237 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	4632415L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70808 MGI:1918058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Cp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12870 MGI:88476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Hps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12807 MGI:2153839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hltf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20585 MGI:1196437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gyg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27357 MGI:1351614
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpa3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12873 MGI:88479
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664965 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664965 MGI:3647720
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins pseudo : _no_value

name	LOC100040283 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Cpb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76703 MGI:1923953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agtr1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11608 MGI:87965
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665094 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665094 MGI:3647006
definition	note : predicted gene, EG665094 pseudo : _no_value

name	Dnajc5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42475999 GeneID:66326 MGI:1913576
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 5 beta transcript_id : NM_025489.2

name	EG620290 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369437 GeneID:620290 MGI:3646012
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : predicted gene, EG620290 transcript_id : XM_884597.2

name	Trim55 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486876 GeneID:381485 MGI:3036269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif-containing 55 transcript_id : NM_001081281.1

name	Crh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45429989 GeneID:12918 MGI:88496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : corticotropin releasing hormone transcript_id : NM_205769.1

name	Cp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110815852 GeneID:12870 MGI:88476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceruloplasmin transcript_id : NM_001042611.1

name	Cp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347563 GeneID:12870 MGI:88476
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceruloplasmin transcript_id : NM_007752.2

name	Hps3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385576 GeneID:12807 MGI:2153839
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hermansky-Pudlak syndrome 3 homolog (human) transcript_id : NM_080634.3

name	Hltf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67763823 GeneID:20585 MGI:1196437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : helicase-like transcription factor transcript_id : NM_009210.2

name	Hltf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67763821 GeneID:20585 MGI:1196437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : helicase-like transcription factor transcript_id : NM_144959.2

name	Gyg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326475 GeneID:27357 MGI:1351614
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycogenin transcript_id : NM_013755.2

name	Cpa3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680998 GeneID:12873 MGI:88479
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase A3, mast cell transcript_id : NM_007753.1

name	Cpb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56550070 GeneID:76703 MGI:1923953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase B1 (tissue) transcript_id : NM_029706.1

name	Agtr1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341262 GeneID:11608 MGI:87965
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiotensin II receptor, type 1b transcript_id : NM_175086.2

name	Dnajc5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476000 CCDS:CCDS17257.1 GeneID:66326 MGI:1913576
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : DnaJ (Hsp40) homolog, subfamily C, member 5 beta protein_id : NP_079765.2

name	EG620290 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82800464 GeneID:620290 MGI:3646012
definition	codon_start : 1 product : similar to bcl-10 protein_id : XP_889690.1

name	Trim55 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486877 GeneID:381485 MGI:3036269
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : ring finger protein 29 product : tripartite motif-containing 55 protein_id : NP_001074750.1

name	Crh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45429990 CCDS:CCDS17258.1 GeneID:12918 MGI:88496
definition	GO_process : GO:0006954 - inflammatory response [Evidence IMP] codon_start : 1 note : corticoliberin; corticotropin releasing factor product : corticotropin releasing hormone protein_id : NP_991338.1

name	Cp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110815853 GeneID:12870 MGI:88476
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005507 - copper ion binding [Evidence IDA] [Evidence IEA]; GO:0005375 - copper ion transporter activity [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA] [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006825 - copper ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : ceruloplasmin isoform a protein_id : NP_001036076.1

name	Cp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347564 GeneID:12870 MGI:88476
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005507 - copper ion binding [Evidence IDA] [Evidence IEA]; GO:0005375 - copper ion transporter activity [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA] [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006825 - copper ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : ceruloplasmin isoform b protein_id : NP_031778.2

name	Hps3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560001 CCDS:CCDS17260.1 GeneID:12807 MGI:2153839
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_process : GO:0006996 - organelle organization and biogenesis [Evidence IMP] codon_start : 1 exception : mismatches in translation note : cocoa product : Hermansky-Pudlak syndrome 3 homolog protein_id : NP_542365.2

name	Hltf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67763824 CCDS:CCDS17261.1 GeneID:20585 MGI:1196437
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016887 - ATPase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; helicase-like transcription factor-like protein; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 isoform 1 protein_id : NP_033236.2

name	Hltf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67763822 GeneID:20585 MGI:1196437
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016887 - ATPase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; helicase-like transcription factor-like protein; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 isoform 2 protein_id : NP_659208.2

name	Gyg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305121 GeneID:27357 MGI:1351614
definition	GO_function : GO:0008466 - glycogenin glucosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0016051 - carbohydrate biosynthesis [Evidence IEA]; GO:0005978 - glycogen biosynthesis [Evidence IEA] codon_start : 1 product : glycogenin 1 protein_id : NP_038783.1

name	Cpa3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680999 CCDS:CCDS17262.1 GeneID:12873 MGI:88479
definition	GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : mast cell carboxypeptidase A product : carboxypeptidase A3, mast cell protein_id : NP_031779.1

name	Cpb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56550071 CCDS:CCDS17263.1 GeneID:76703 MGI:1923953
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO:0050425 - carboxypeptidase B activity [Evidence ISS] GO_process : GO:0006508 - proteolysis [Evidence ISS] [Evidence IEA] codon_start : 1 product : carboxypeptidase B1 protein_id : NP_083982.1

name	Agtr1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201972 CCDS:CCDS17264.1 GeneID:11608 MGI:87965
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004947 - bradykinin receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0001568 - blood vessel development [Evidence IGI]; GO:0002035 - brain renin-angiotensin system [Evidence IMP]; GO:0042756 - drinking behavior [Evidence IGI] [Evidence IMP]; GO:0001822 - kidney development [Evidence IGI]; GO:0043524 - negative regulation of neuron apoptosis [Evidence IMP]; GO:0001991 - regulation of blood pressure by circulatory renin-angiotensin [Evidence IGI]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : angiotensin receptor 1b protein_id : NP_780295.1

name	LOC665002 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665002
definition	number : 1 pseudo : _no_value

name	LOC100039304 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039304
definition	number : 1 pseudo : _no_value

name	LOC100040237 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040237
definition	number : 1 pseudo : _no_value

name	LOC100040237 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040237
definition	number : 2 pseudo : _no_value

name	LOC100040237 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040237
definition	number : 3 pseudo : _no_value

name	LOC100040283 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040283
definition	number : 1 pseudo : _no_value

name	4632415L05Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250841 GeneID:70808 MGI:1918058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : RIKEN cDNA 4632415L05 gene transcript_id : XR_035234.1

name	EG664965 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94369442 GeneID:664965 MGI:3647720
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins product : predicted gene, EG664965 pseudo : _no_value transcript_id : XR_001700.1

clone name	MSMg01-349K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506K15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-337P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543P12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484E15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-484C19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-108K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063A04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-309I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442E11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-388I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318F04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-179E18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111L11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-201I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-352A16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-484I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500A13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-291F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367I23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-491G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219L02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-201I12.T7 (MSMg01no201_i12.b1)	MSMg01-201I12.TJ (MSMg01no201_i12.g1)
ACC	AG387061	AG387062
length	1,257	1,242
length of high quality (start - end)	674 (92 - 765)	647 (135 - 781)
definition	CHROMAT_FILE: MSMg01no201_i12.b1 PHD_FILE: MSMg01no201_i12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:21:47 2005	CHROMAT_FILE: MSMg01no201_i12.g1 PHD_FILE: MSMg01no201_i12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:21:47 2005
singlet/doublet	singlet	---
BLAST hit	plural	no hit data
sequence	CAATATTNNNNNNNAGCACTGGGCGCTATAXXXXXXXXXXXXXXXXXXXX XXCGCGGAATTCCTTATATAGAGAGAAACCTTTTATGTGCAAAAAATATA TAACAGAAATTTCTTGATACCCTTTTGAGTCTAAAATTCTGTTTAGTTCC AATTCCCTTTGTAGCTAAAAACTTTCCCCTAGTTAGAGCATTTACTGATA TTTAGGTCCAGTAAGTTTCATCCTTCACAATTAGAAACCTAAAAGAATTT CACATTTTCAGATGTGCTTGGATTGCAGAAAAAAATCTCTTCTTAGCTCA ATGTTCCTCTAGTGGACAGCTGATCAGTCTAGTACATATAAGAGATCAAT ACTTCACCTGGAATACTATTTTTAAATGGCAGAAACATCCAATAATTCAA TGACAACAAAGACTTACCATCGTAAGTTATTATCTCATTTCTCAGGAACA GAAAATCATGTCTGGCACTGAAAGGAGGAGGTCACAGGAGGTCATGCTTT TTTGAGAAAGTCTTGTCACTAATTCACTAAACAAGCATGATTCCTAACTT GATTTTAAATATTTAAGCTAATATTCACAGATAATGTAGCCCTTACCCAT CCATCAAAGAAGGGTCTCTTTGTAATGGATCTAGACTATTAGTGGATTAG ACAGCTACTCAAGGTATACAGAACAAAATATCCTGTGGCTCTGAGTTGCA GGGCATACACGTACACAGTAACTTCTGAAACATAGGCTCTGAACAATGGG TAAAGAGTCAGAGAAATTTTACACCAGAGAATCAGGAACTTTGCTTTGAG ATTGAACCTCCTAGAAATAAGGAGGAAGGCTTCACTTTTTGATGGTGCAN AAATATCATTGCTTAAACCATTTCTGAACAAAGCATCATTGAAAGCTACC CTAATGAATAATGAAGGAATGTCATGAAGCCAAACTTCTCCATAAGAACT ATATGCATGTAAATACTACTGAGAGAATGTTAGTCTTTCCCAAAGTGAAC TCTGTATATTGTAATCCAATCCCGTTTGTTTATCCCCTAATAGTTCTTTA TTTACCTCCCAATAAGGGATTCCTCTCTTGTTTTCAAAATATTTTGAATC CCTTTTGATCTCTAAATTATGTAGAGTTCACAAAAATTCTTCTGTCTTTT CTTCTCTATGTTCATATCTGTTGCCTCTATTTCTTTCTATTTTTTCTGCT TAAACTCAAATCTTATATTTTCTATTTTCATATTTATAACACATTATTTC TTGCTTA	NCCAATTTTTNNNNNGAAGACGTGAXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXCCTTTTAATCTCCCTCGAAATA TCTACAGGGCAACTTCTATACCTTAAAGAACCTTAGGGATCATAGAAGAA ACCTCAGAAAGACTGTACAAGAATGTCTGATGTCTGTATCTTCTAGATGT AACAGGGAAGCTACATCTGTGAACTCTCAACAATAATGTCACCTAAATAA GACCCACATAAAGACATCAGTTGACATGTCAACATGGATGGAGGAAAATT TACAAGGTTCCATGTAAAGATAAAGACCTATGGTTATAGAGGAAGGAGAT CAGTTTTCTCCTATGTACCAAGGGGGTTATTTATCCATATGGTAGAATCT GCCCAATGAGACCCTTATAGTCAGCCATAAATACATTGTCTTAGTTCATC TTTTGTGATAAATCCTATGAGGAAGACCAACTTGAGAAAGAAGGGGTTTA TTACATCTTACAAGTTAAAGTTCACCATGAAGGGAAGCTATGGCCAGGCA CTCAGGGCAGGAATTTGGAAGCAGGAACTGATGGAGAACCATGGGAAAAT ATTACTTACTGTTATTCCATGTCAGGTGTAGTCTGCTTTCTTGCACAGCC TAGGACTACTTGCCAGGGGTGTCACCTCTCATAGTAGCCTGGGCTTTCCC ACATCAATCAGTACTTAATAAATGCTCTACAGACTTGCTATTCTGACAGA AGTAGTTCCTTAATTGATATTCCCTGTTTCTAGATGGTTCTAGTTTGTGC CAAGCTGACAAAACCCAGCCACCATGAATATGTACAAATGAGCAACATGA ACTCATACACCTATGTATTTATTTGTGTGTGCATGTGTGTGCATCAGTAA TATTTAAAGAAAAAGGCCCTGAACTCACAAGGGCAGGGTGTACTCTAATG ATTTTTTAAGATATATTTACGTTTGATAATTTTTTTTCTTCTTTTTTTAT TTTTTCTTATTTTTATTTTCTTAATATTTTTTTATTTTCTTATTTTTCTC TTTTTTTTTCTTTCTCTGATCTTTACTCCTTTTACTTTCTTTTTTTTTTT TTACTTCTCTAATTTATTATGTTTCTTCTTTTTTTATTTCTCCTTCTTTT TTCTCTAATTTTCTTTTTTCTTTTCTTTATTTGTTCTCCATTTTTTTTTA TTATTCTTGTCTCTTTTTATTTTCTTTCTCCTCTCTTTCTCT
quality values	Open. Hide. 9 9 9 9 10 9 3 0 0 0 0 0 0 0 3 7 6 6 6 6 7 6 9 9 9 8 8 8 8 8 8 15 15 14 14 14 18 20 20 20 24 24 35 28 28 28 29 33 34 37 37 37 36 37 37 37 37 47 43 43 47 47 47 47 36 36 36 36 36 33 33 33 37 37 37 37 28 25 12 12 12 10 9 8 8 8 8 10 10 10 8 10 12 30 41 48 57 53 53 53 53 53 53 50 57 57 57 57 57 48 47 41 33 33 33 31 37 35 35 21 17 15 15 15 30 30 37 25 22 21 21 19 19 19 29 34 44 47 53 53 50 43 43 43 43 43 43 48 48 23 23 11 12 12 12 16 32 34 42 42 42 43 41 41 41 41 42 41 47 48 47 47 54 57 57 59 57 57 57 50 48 46 41 48 41 47 47 59 59 57 57 57 57 57 57 57 57 54 57 57 57 57 57 48 48 57 57 57 57 57 57 43 43 50 57 57 57 57 50 54 54 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 52 52 52 52 59 59 68 68 59 59 57 57 57 59 59 68 68 59 59 57 57 57 59 57 57 59 57 57 57 57 57 57 57 57 57 43 39 39 57 59 59 59 59 59 68 68 68 68 68 68 68 68 57 57 57 57 62 62 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 52 52 62 62 62 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 52 62 52 62 62 62 62 62 62 62 68 68 68 68 62 62 52 52 52 62 62 39 39 11 10 10 10 10 10 14 14 29 39 44 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 68 68 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 52 57 59 59 59 68 68 68 68 68 68 68 68 59 59 59 59 68 68 68 59 68 68 68 59 59 59 59 59 68 59 57 57 57 57 57 57 57 57 57 57 68 68 68 57 57 57 57 68 59 59 57 57 59 57 48 54 48 48 48 59 48 48 48 57 57 57 57 46 46 43 43 37 43 44 54 54 54 57 48 48 48 59 59 57 48 42 42 47 47 47 50 50 57 59 48 48 48 48 47 47 47 41 39 39 35 31 36 37 37 37 40 36 37 41 37 39 39 36 36 39 43 37 39 35 35 28 33 28 35 39 39 43 44 43 48 46 43 30 28 24 17 13 14 27 28 40 39 41 39 39 37 29 25 30 24 23 23 22 12 16 16 22 22 30 34 24 20 20 30 30 33 37 37 18 19 11 11 11 19 14 24 14 14 12 25 22 30 37 35 31 36 39 39 32 31 27 26 20 24 25 27 25 21 24 21 30 21 30 21 21 20 23 22 21 17 20 19 20 24 27 23 19 13 16 18 20 28 29 29 26 25 18 19 17 17 17 22 30 32 25 20 18 13 14 22 23 22 19 29 18 17 12 12 9 13 24 19 19 3 0 3 13 15 20 25 28 33 33 33 34 34 30 25 25 24 26 21 18 28 22 23 18 19 24 22 16 13 16 18 19 23 20 20 20 21 16 21 28 23 24 29 32 33 47 25 25 17 10 10 8 8 8 8 10 15 24 24 23 23 15 15 15 18 16 14 9 9 9 9 9 9 8 8 8 8 8 10 8 12 12 12 9 10 12 12 13 13 22 22 20 12 11 12 15 13 13 8 8 8 8 8 9 8 8 8 6 6 8 10 12 16 12 14 13 13 12 12 12 14 14 15 9 10 8 8 8 8 8 10 9 12 9 10 9 10 10 13 13 13 11 12 13 11 11 10 10 9 10 10 10 8 8 8 8 8 10 8 8 8 9 12 9 12 10 10 9 10 8 8 8 8 8 10 10 11 8 6 6 10 12 8 10 10 10 10 11 12 11 9 10 9 9 9 10 16 13 8 8 6 6 8 8 10 10 10 10 10 13 13 10 10 13 10 8 8 8 10 9 10 10 10 8 8 7 7 8 8 10 9 9 11 16 12 12 11 11 8 8 8 8 10 10 10 10 10 10 9 11 12 15 10 11 12 21 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 11 10 10 10 10 9 9 9 9 9 9 13 10 12 9 9 9 9 9 8 8 8 8 8 8 10 10 9 7 8 8 8 6 6 6 7 8 8 8 6 6 8 8 8 8 6 6 8 8 10 10 8 8 10 11 8 8 10 8 8 6 6 8 8 10 8 8 8 8 10 16 12 10 10 9 9 9 9 10 9 9 9 9 9 9 10 11 10 10 9 10 9 9 9 9 10 13 10 10 10 10 12 11 13 9 9 9 9 12 10 10 10 8 8 8 8 8 8 8 6 6 8 8 6 7 11 8 8 7 8 8 8 8 7 7	Open. Hide. 0 3 8 8 8 10 10 9 9 3 0 0 0 0 0 3 9 9 6 6 6 6 8 8 8 9 6 7 6 6 6 10 15 9 10 11 7 7 9 8 9 9 13 13 19 8 9 9 22 19 19 10 10 17 24 30 35 35 37 37 36 37 28 28 28 30 36 36 47 41 50 50 50 37 27 21 10 8 7 8 8 11 11 12 13 11 11 12 10 8 8 8 11 11 27 34 37 37 39 31 31 31 30 29 24 24 9 9 9 9 19 37 30 30 28 30 31 29 19 13 10 13 10 9 9 10 10 12 21 11 11 11 17 17 11 18 22 37 39 50 50 50 50 50 50 41 29 23 11 11 9 9 9 10 10 15 20 47 59 59 48 48 48 47 50 47 53 53 53 53 53 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 54 54 54 54 54 68 68 68 68 68 68 59 57 57 57 57 57 57 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 46 37 30 21 21 16 14 14 14 14 14 28 24 37 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 59 59 59 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 54 54 54 59 59 59 68 57 57 57 57 57 59 59 48 47 57 47 48 48 48 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 59 57 57 68 68 68 68 68 59 59 57 59 59 59 57 57 59 59 59 59 57 57 68 68 68 68 59 59 59 59 59 59 59 59 57 57 57 57 57 68 68 68 57 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 50 47 47 47 39 39 41 31 39 30 30 30 39 43 50 59 59 59 59 59 59 59 59 59 59 57 57 48 48 47 47 47 47 50 50 57 59 48 48 48 48 39 39 39 39 41 59 43 41 41 44 59 59 59 59 59 59 59 59 59 59 48 48 48 48 48 48 47 47 47 41 43 43 43 32 32 32 32 29 32 39 39 59 59 59 59 41 42 39 39 39 39 37 41 43 43 37 39 47 59 59 59 59 47 41 41 37 30 29 32 37 37 39 34 32 39 32 32 30 27 27 32 39 39 39 40 39 39 39 39 39 37 39 39 37 27 27 18 18 13 28 22 17 8 6 6 8 8 13 19 28 28 36 36 22 22 11 10 10 21 21 33 31 29 29 25 22 14 19 10 10 8 8 8 8 8 11 16 19 28 28 22 21 27 11 12 10 11 11 16 11 17 11 10 9 10 15 22 15 16 12 9 9 8 10 10 11 8 8 10 10 19 24 28 22 8 8 8 8 10 14 11 14 9 9 9 13 13 15 10 9 8 8 8 8 8 8 10 10 10 10 10 10 9 9 9 9 10 10 10 10 10 10 8 8 15 10 10 14 23 23 18 14 11 10 10 10 12 18 13 15 10 10 10 13 8 8 8 10 8 10 11 11 9 9 9 10 11 10 10 8 8 8 7 7 7 7 8 8 6 8 8 8 8 6 8 8 8 10 8 9 9 8 10 6 6 8 8 8 6 8 8 8 8 11 8 8 8 10 12 12 8 8 8 8 8 8 10 16 12 19 14 17 15 10 7 6 8 8 10 10 8 8 9 8 8 8 8 10 10 10 10 13 10 8 8 8 8 10 13 15 8 6 6 8 8 9 11 11 15 8 8 6 6 8 6 9 12 12 10 11 11 11 11 8 8 10 10 8 9 11 12 10 11 6 7 6 6 6 11 11 10 10 10 10 10 8 8 7 11 8 8 8 8 8 8 6 6 8 8 15 8 8 8 8 8 8 9 19 22 13 11 11 11 10 10 10 10 10 10 19 24 18 15 12 11 11 10 10 8 8 6 6 8 8 11 13 11 9 9 9 14 9 9 11 10 12 9 9 9 11 11 9 9 12 9 9 7 7 10 10 12 8 8 10 10 8 6 6 6 6 8 10 10 10 13 8 11 11 8 10 10 13 6 6 9 9 12 13 9 9 9 12 16 12 10 8 8 8 8 8 8 10 10 10 10 9 6 13 8 6 6 10 10 10 8 8 8 8 13 9 10 14 13 16 14 9 9 10 9 9 9 13 10 10 9 7 8 7 6 9 7 13 12 10 8 10 8 10 17 15 8 8 10 8 11 8 8 8 8 8 6 6 10 15 13 7 7 8 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no201_i12.b1 MSMg01no201_i12.b1 CHROMAT_FILE:
MSMg01no201_i12.b1 PHD_FILE: MSMg01no201_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:47 2005
         (674 letters)



>mm_chr3_20359088_20360159
          Length = 1072

 Score = 1004 bits (519), Expect = 0.0
 Identities = 549/559 (98%), Gaps = 2/559 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaaatatataacagaaatttcttgatacccttttgagtctaaaattctgtttagttcca 60
           |||||||||||||||||||||||  |||| | ||||||||||||||||||||||||||||
Sbjct: 557 aaaaatatataacagaaatttctcaatacacatttgagtctaaaattctgtttagttcca 498

                                                                       
Query: 61  attccctttgtagctaaaaactttcccctagttagagcatttactgatatttaggtccag 120
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atttcctttgtagctaaaaactttcccctagttagagcatttactgatatttaggtccag 438

                                                                       
Query: 121 taagtttcatccttcacaattagaaacctaaaagaatttcacattttcagatgtgcttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 taagtttcatccttcacaattagaaacctaaaagaatttcacattttcagatgtgcttgg 378

                                                                       
Query: 181 attgcagaaaaaaatctcttcttagctcaatgttcctctagtggacagctgatcagtcta 240
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 attgcag-aaaaaatctcttcttagctcaatgttcctctagtggacagctgatcagtcta 319

                                                                       
Query: 241 gtacatataagagatcaatacttcacctggaatactatttttaaatggcagaaacatcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtacatataagagatcaatacttcacctggaatactatttttaaatggcagaaacatcca 259

                                                                       
Query: 301 ataattcaatgacaacaaagacttaccatcgtaagttattatctcatttctcaggaacag 360
           ||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||
Sbjct: 258 ataattcaatgacaacaaagac-aaccatcgtgagttattatctcatttctcaggaacag 200

                                                                       
Query: 361 aaaatcatgtctggcactgaaaggaggaggtcacaggaggtcatgcttttttgagaaagt 420
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aaaatcatgcctggcactgaaaggaggaggtcacaggaggtcatgcttttttgagaaagt 140

                                                                       
Query: 421 cttgtcactaattcactaaacaagcatgattcctaacttgattttaaatatttaagctaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 cttgtcactaattcactaaacaagcatgattcctaacttgattttaaatatttaagctaa 80

                                                                       
Query: 481 tattcacagataatgtagcccttacccatccatcaaagaagggtctctttgtaatggatc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  tattcacagataatgtagcccttacccatccatcaaagaagggtctctttgtaatggatc 20

                              
Query: 541 tagactattagtggattag 559
           |||||||||||||||||||
Sbjct: 19  tagactattagtggattag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1072
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1062
Effective search space:   705168
Effective search space used:   705168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information