XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTGA
TCTTTCCAGAACTTTTATCATGAATGGGTGTTGGATCTTGTCAAATGCTT
TTTCTGCATCTAACCAGAGGATCATGTGGTTTTCGTCTTTGAGTTTGTTT
ATATAATGGATTACATTGATGGATTTTCGTATATTAAACCATCCCTGCAT
CCCTGGAATAAAACCTACTTGCTCAGGATGGATGATTGCTTTAATGTGCT
CTTGGATTTGGTTATCTATTATTTCATCCCTTATCTTCTTTTTTTATTTC
CTCCATCCTTTTTTTTTTTTTTTCACCTCTCCACCATATTAAATTTTTTT
ATTTTTTTTTCCCCCCCCCCCCCCCCCCTTTTATTTCCTCTTTTCCTTCT
TTACTTTTTTTTCACCCCCCTTATAAAAAAAATAATTTTTTTATTGCTGC
GCTCCCCATATTTCATCTTATTTCTTCTTTCATTCTCCTCTTATCTTTTC
CCTTCATTTTACACTTCTTACCCTCATCTCTTTTTTCACTTCATTATTTT
ACTCCTTATTCCCCCCTTTTTTTCCTTTATTTTTCTTTTCCCCCCTATAC
ACATATCTTTTTTTTATTTTCCCTCCCCTCTCTCTCCTTCCTTATTTATC
CCCCCCCCCCCATCCCATTTTACGTCTTATCATTTCTTTTACTATTCCGT
TTTTCCCCCTTCACTTTTTTTCTCTTCATTGTCTCATAATATATTGATAC
TCATCTATTATAATGCCTTTCTTTCTTGCTCTCTCTATATATACCATTTA
CTATATACCCCTCTATACACATCCTTTTTTCAATTTATTN

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCACATGGGATAAGTTCAAACATTC
AGAATTTCCTCTTGGAGGCTGAACCGGAGCCTGACAGCTAATTATTACCC
TGCTGCTGACACAGGAGAACAGCAGAACAAGGTCTATATGTTCTTCACAT
TTCCTTTCAAATCTAACCCATCTCTGGCTCATCACCACCCTCCCATTTGA
TATTGTGGTCTAGTAGTGCTTCCTTCATAGCCAATCCATCTTCCTTCATA
ACAAAGATAGACCCCTTAAAGGCCCAGGTGTTTGTCTTCATACCCTTCAT
TTGAACATTGTGGTGACTATATTCCTGGCTCTATATACCTGAATGGTGAA
AGAGGAAGGCAAAGCTCACCTGAGTGTGGAACATCTAGGATGTGGATTGA
AGAAGGGAAAAGTATGAATCATGAGGACAGGATGCTTAGCAATGGAGGGA
GAGAAGGTGGAATTCATTACAAGACATGATTTTGAGATAAAACAATTGTG
TACTTAGCAGTGAGGTTATAAGTCTGTGAGTTCATTATTTGACAACACAA
GACAAAATTATAGATGCACTCATGAGAGATGTAGTTAAAACACTATCAGT
ACGTGATAGTCTCATAATGACCATGAGTTAGACTCGAATCTTGTTGTTGA
TCAGAACCACTATTTCACTTATACTTATAATTCATG

Query= MSMg01no202_b22.g1 MSMg01no202_b22.g1 CHROMAT_FILE:
MSMg01no202_b22.g1 PHD_FILE: MSMg01no202_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:49 2005
         (518 letters)



>mm_chr3_80512403_80513320
          Length = 918

 Score =  948 bits (490), Expect = 0.0
 Identities = 511/518 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacatgggataagttcaaacattcagaatttcctcttggaggctgaaccggagcctgaca 60
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 718 cacatgggataagttcaaacattcagaatttcctcttggaggctgaagtggagcctgaca 659

                                                                       
Query: 61  gctaattattaccctgctgctgacacaggagaacagcagaacaaggtctatatgttcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gctaattattaccctgctgctgacacaggagaacagcagaacaaggtctatatgttcttc 599

                                                                       
Query: 121 acatttcctttcaaatctaacccatctctggctcatcaccaccctcccatttgatattgt 180
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 acacttcctttcaaatctaacccatctctggctcatcaccaccctcccatttgatattgt 539

                                                                       
Query: 181 ggtctagtagtgcttccttcatagccaatccatcttccttcataacaaagatagacccct 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggtctagtagtgcttccttcataaccaatccatcttccttcataacaaagatagacccct 479

                                                                       
Query: 241 taaaggcccaggtgtttgtcttcatacccttcatttgaacattgtggtgactatattcct 300
           ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 478 taaaggcacaggtgtttgtcttcatacccttcatttgaactttgtggtgactatattcct 419

                                                                       
Query: 301 ggctctatatacctgaatggtgaaagaggaaggcaaagctcacctgagtgtggaacatct 360
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ggttctatatacctgaatggtgaaagaggaaggcaaagctcacctgagtgtggaacatct 359

                                                                       
Query: 361 aggatgtggattgaagaagggaaaagtatgaatcatgaggacaggatgcttagcaatgga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aggatgtggattgaagaagggaaaagtatgaatcatgaggacaggatgcttagcaatgga 299

                                                                       
Query: 421 gggagagaaggtggaattcattacaagacatgattttgagataaaacaattgtgtactta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gggagagaaggtggaattcattacaagacatgattttgagataaaacaattgtgtactta 239

                                                 
Query: 481 gcagtgaggttataagtctgtgagttcattatttgaca 518
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gcagtgaggttataagtctgtgagttcattatttgaca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space:   461264
Effective search space used:   461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)