Query= MSMg01no202_p19.b1 MSMg01no202_p19.b1 CHROMAT_FILE:
MSMg01no202_p19.b1 PHD_FILE: MSMg01no202_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:00 2005
(514 letters)
>mm_chr3_100975100_100976013
Length = 914
Score = 928 bits (480), Expect = 0.0
Identities = 505/514 (98%), Gaps = 2/514 (0%)
Strand = Plus / Plus
Query: 1 gaatcctggagaaatgccggagatgagaaacataaataagatctgtgagaagtcccttca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 gaatcctggagaaatgccggagatgagaaacataaataagatctgtgagaagtctcttca 260
Query: 61 gtagaaaggggtgaggagatgagagtgtctgagcccgaggccgaggtgggagactgcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtagaaaggggtgaggagatgagagtgtctgagcccgaggccgaggtgggagactgcagc 320
Query: 121 aagcaaacagacgcagacaaaattacacggagggtgccgtgtgaataaccaagtatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcaaacagacgcagacaaaattacacggagggtgccgtgtgaataaccaagtatatat 380
Query: 181 cctcctccgaagacaccaagtatatgggttgcagaaagcatttttaaaggactcataagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcctccgaagacaccaagtatatgggttgcagaaagcatttttaaaggactcataagg 440
Query: 241 ggaaagttctcagaattaagggaaaaaaaaaaaaagatggtaatgcaggtccagtaagat 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||
Sbjct: 441 ggaaagttctcagaattaagg--aaaaaaaaaaaagatggtaatgcaggtccaggaggat 498
Query: 301 tttatgactgcagctagaaaactctggaaaagaacctcccttatattacaaccaaaataa 360
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 499 tttatgactgcagctagaaaactctggaaaagaacctcccttatattataattaaaataa 558
Query: 361 taaacacacaaatcaaagaaagtatattaaaagggggaaaagagaaacacaggcttgcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 taaacacacaaatcaaagaaagtatattaaaagggggaaaagagaaacacaggcttgcgt 618
Query: 421 atgaagacaggttgtcagagtgacagccagttcttcaaacaagactctaaaagccagaag 480
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 619 atgaagacaggttgtcagagtgacagccagttcctcaaacaagactctaaaagccagaag 678
Query: 481 gtcttggaattatgtatttcagtttctgaagggc 514
||||||||||||||||||||||||||||||||||
Sbjct: 679 gtcttggaattatgtatttcagtttctgaagggc 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no202_p19.g1 MSMg01no202_p19.g1 CHROMAT_FILE:
MSMg01no202_p19.g1 PHD_FILE: MSMg01no202_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:00 2005
(285 letters)
>mm_chr3_101111065_101111749
Length = 685
Score = 549 bits (284), Expect = e-161
Identities = 284/284 (100%)
Strand = Plus / Minus
Query: 1 tctctttaggagaacttaaaaataggtcaggtcagccccgatggattggacaggttaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tctctttaggagaacttaaaaataggtcaggtcagccccgatggattggacaggttaagg 379
Query: 61 tgtgagtttcctctgtgggagagagcccagctgggtattttcagggtctcccattagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgtgagtttcctctgtgggagagagcccagctgggtattttcagggtctcccattagcct 319
Query: 121 gtgatcctaagattccacttatgggcactttctatgtctgtcatttttaaagctggttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtgatcctaagattccacttatgggcactttctatgtctgtcatttttaaagctggttaa 259
Query: 181 cttggtggcttcattatttcccatcccctcccaattccccacgggggctctaactaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cttggtggcttcattatttcccatcccctcccaattccccacgggggctctaactaaatc 199
Query: 241 agaccacatttggagtctgtgtttctctctgggcagcacatttc 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 agaccacatttggagtctgtgtttctctctgggcagcacatttc 155
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
